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SCNpilot_cont_500_bf_scaffold_4944

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4944_1
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..875
DNA (873bp) protein (291aa)
amn; AMP nucleosidase; K01241 AMP nucleosidase [EC:3.2.2.4]
AMP nucleosidase {ECO:0000256|HAMAP-Rule:MF_01932}; EC=3.2.2.4 {ECO:0000256|HAMAP-Rule:MF_01932};; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
AMP nucleosidase n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JUL6_AGRVS
SCNpilot_cont_500_bf_scaffold_4944_2
Rhizobium sp. R1-200B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(942..2309)
DNA (1368bp) protein (456aa)
aminotransferase n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI0003825582
Aminotransferase {ECO:0000313|EMBL:KEQ03160.1}; TaxID=1509405 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R1-200B4.;"
bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase
SCNpilot_cont_500_bf_scaffold_4944_3
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2508..3863
DNA (1356bp) protein (452aa)
glutamine synthetase; K01915 glutamine synthetase [EC:6.3.1.2]
Glutamine synthetase n=1 Tax=Rhizobium sp. CF122 RepID=J2R6Q6_9RHIZ rbh
Glutamate--putrescine ligase {ECO:0000313|EMBL:CDN53269.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
SCNpilot_cont_500_bf_scaffold_4944_4
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3864..4835)
DNA (972bp) protein (324aa)
Diacylglycerol kinase catalytic subunit n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8AWZ2_RHIRD rbh
Diacylglycerol kinase {ECO:0000313|EMBL:KGD85765.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
diacylglycerol kinase catalytic subunit; K07029 rbh
SCNpilot_cont_500_bf_scaffold_4944_5
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5102..6370
DNA (1269bp) protein (423aa)
MFS transporter n=1 Tax=Rhizobium mongolense RepID=UPI0003B3D330 rbh
Major facilitator superfamily protein {ECO:0000313|EMBL:AJD40594.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
permease; K08156 MFS transporter, DHA1 family, arabinose polymer transporter rbh
SCNpilot_cont_500_bf_scaffold_4944_6
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6374..6661)
DNA (288bp) protein (96aa)
Leucine-responsive regulatory protein Lrp n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CHD0_9RHIZ
Putative AsnC family transcriptional regulator {ECO:0000313|EMBL:AHK43802.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
lrp1; Leucine-responsive regulatory protein
SCNpilot_cont_500_bf_scaffold_4944_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6990..7919
DNA (930bp) protein (310aa)
Putative permease n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CM59_9RHIZ
Putative permease, DMT superfamily {ECO:0000313|EMBL:EYR81202.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
integral membrane protein DUF6
SCNpilot_cont_500_bf_scaffold_4944_8
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7903..8901)
DNA (999bp) protein (333aa)
Glycine betaine/L-proline-binding protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D4C3_9RHIZ rbh
Glycine betaine/L-proline-binding protein {ECO:0000313|EMBL:EYR81200.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
glycine betaine ABC transporter periplasmic protein; K02002 glycine betaine/proline transport system substrate-binding protein rbh
Displaying 8 items

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