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SCNpilot_cont_500_bf_scaffold_4972

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4972_1
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

108..1190
DNA (1083bp) protein (361aa)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
cheB; chemotaxis two-component response regulator protein-glutamate methylesterase (EC:3.1.1.61); K03412 two-component system, chemotaxis family, response regulator CheB [EC:3.1.1.61] rbh
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Rhizobium sp. CF142 RepID=J2KUV3_9RHIZ rbh
SCNpilot_cont_500_bf_scaffold_4972_2
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1267..1722)
DNA (456bp) protein (152aa)
protein required for attachment to host cells n=1 Tax=Rhizobium mongolense RepID=UPI0003B4442D
Host attachment protein {ECO:0000313|EMBL:AJD40615.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4972_3
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1829..4351)
DNA (2523bp) protein (841aa)
preprotein translocase subunit SecD n=1 Tax=Rhizobium mongolense RepID=UPI0003B43676 rbh
Preprotein translocase subunit SecDF 1 {ECO:0000313|EMBL:AJD40050.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
secD; bifunctional preprotein translocase subunit SecD/SecF; K12257 SecD/SecF fusion protein rbh
SCNpilot_cont_500_bf_scaffold_4972_4
unknown

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comp(4445..4849)
DNA (405bp) protein (135aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4972_5
bacterium YEK0313, Bacteria

Not on your lists

5015..5422
DNA (408bp) protein (136aa)
Cu(I)-responsive transcriptional regulator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I2X1_9RHIZ
HTH-type transcriptional regulator HmrR {ECO:0000313|EMBL:CEJ11412.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
Cu(I)-responsive transcriptional regulator
SCNpilot_cont_500_bf_scaffold_4972_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5474..5959)
DNA (486bp) protein (162aa)
heavy metal translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4]
Heavy metal translocating P-type ATPase n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q138E9_RHOPS
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:ABE39540.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
SCNpilot_cont_500_bf_scaffold_4972_7
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6187..6915
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VH18_9RHOB
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
SCNpilot_cont_500_bf_scaffold_4972_8
unknown

Not on your lists

7192..7893
DNA (702bp) protein (234aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4972_9
CG_Rhodob_01, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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8024..8221
DNA (198bp) protein (66aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000374BF0D
heavy metal transport/detoxification protein; K07213 copper chaperone
Tax=CG_Rhodob_01
SCNpilot_cont_500_bf_scaffold_4972_10
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8265..8630
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF080 RepID=J3C9U9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EUB97386.1}; Flags: Precursor;; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
hypothetical protein; K09790 hypothetical protein
SCNpilot_cont_500_bf_scaffold_4972_11
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8925..9827
DNA (903bp) protein (301aa)
Benzoate--CoA ligase {ECO:0000313|EMBL:EUC00807.1}; EC=6.2.1.25 {ECO:0000313|EMBL:EUC00807.1};; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
AMP-dependent synthetase and ligase; K08295 2-aminobenzoate-CoA ligase [EC:6.2.1.32]
2-aminobenzoate-CoA ligase n=1 Tax=Hoeflea sp. 108 RepID=UPI00035E47C5
SCNpilot_cont_500_bf_scaffold_4972_12
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9793..10383
DNA (591bp) protein (197aa)
AMP-dependent synthetase and ligase; K08295 2-aminobenzoate-CoA ligase [EC:6.2.1.32]
Acid-CoA ligase n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BQI7_9RHIZ
Acid-CoA ligase {ECO:0000313|EMBL:EIM71839.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
SCNpilot_cont_500_bf_scaffold_4972_13
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10380..11579
DNA (1200bp) protein (400aa)
Kynureninase {ECO:0000256|HAMAP-Rule:MF_01970, ECO:0000256|PIRNR:PIRNR038800}; EC=3.7.1.3 {ECO:0000256|HAMAP-Rule:MF_01970, ECO:0000256|PIRNR:PIRNR038800};; L-kynurenine hydrolase {ECO:0000256|HAMAP-Rule:MF_01970}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
kynureninase (EC:3.7.1.3); K01556 kynureninase [EC:3.7.1.3] rbh
Kynureninase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HSA5_9RHIZ
SCNpilot_cont_500_bf_scaffold_4972_14
Mesorhizobium sp. LNJC391B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11576..12406
DNA (831bp) protein (277aa)
Tryptophan 2,3-dioxygenase {ECO:0000256|HAMAP-Rule:MF_01972}; Short=TDO {ECO:0000256|HAMAP-Rule:MF_01972};; EC=1.13.11.11 {ECO:0000256|HAMAP-Rule:MF_01972};; Tryptamin 2,3-dioxygenase {ECO:0000256|HAMAP-Rule:MF_01972}; Tryptophan oxygenase {ECO:0000256|HAMAP-Rule:MF_01972}; Tryptophan pyrrolase {ECO:0000256|HAMAP-Rule:MF_01972}; Tryptophanase {ECO:0000256|HAMAP-Rule:MF_01972}; TaxID=1287273 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Meso
tryptophan 2,3-dioxygenase; K00453 tryptophan 2,3-dioxygenase [EC:1.13.11.11]
tryptophan 2,3-dioxygenase n=1 Tax=Hoeflea sp. 108 RepID=UPI000366E3C5
SCNpilot_cont_500_bf_scaffold_4972_15
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12436..14574)
DNA (2139bp) protein (713aa)
Methylmalonyl-CoA mutase, large subunit {ECO:0000313|EMBL:EUC00866.1}; EC=5.4.99.2 {ECO:0000313|EMBL:EUC00866.1};; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
mutA; methylmalonyl-CoA mutase (EC:5.4.99.2); K01847 methylmalonyl-CoA mutase [EC:5.4.99.2] rbh
Methylmalonyl-CoA mutase n=1 Tax=Rhizobium sp. RepID=L0NMX0_RHISP rbh
SCNpilot_cont_500_bf_scaffold_4972_16
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14634..16640)
DNA (2007bp) protein (669aa)
carbamoyl-phosphate synthase L chain ATP-binding; K01965 propionyl-CoA carboxylase alpha chain [EC:6.4.1.3] rbh
Propionyl-CoA carboxylase alpha chain, mitochondrial n=1 Tax=Rhizobium sp. RepID=L0NLA3_RHISP rbh
Acetyl-CoA carboxylase {ECO:0000313|EMBL:KGD97004.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
SCNpilot_cont_500_bf_scaffold_4972_17
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16665..16931)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CSX3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR84010.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4972_18
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16968..17324)
DNA (357bp) protein (119aa)
PCCB; propionyl-CoA carboxylase subunit beta (EC:6.4.1.3)
Putative propionyl-CoA carboxylase beta chain {ECO:0000313|EMBL:CCE99606.1}; EC=6.4.1.3 {ECO:0000313|EMBL:CCE99606.1};; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
methylmalonyl-CoA carboxyltransferase n=1 Tax=Rhizobium meliloti RepID=UPI00030F5AA5
SCNpilot_cont_500_bf_scaffold_4972_19
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17341..18405)
DNA (1065bp) protein (355aa)
propionyl-CoA carboxylase; K01966 propionyl-CoA carboxylase beta chain [EC:6.4.1.3]
methylmalonyl-CoA carboxyltransferase n=1 Tax=Hoeflea sp. 108 RepID=UPI000365C899
Carboxyl transferase {ECO:0000313|EMBL:EHS53677.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
SCNpilot_cont_500_bf_scaffold_4972_20
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18550..19962
DNA (1413bp) protein (471aa)
Cro/Cl family transcriptional regulator n=1 Tax=Rhizobium giardinii RepID=UPI00037AF01E rbh
HTH-type transcriptional regulator puuR; K07110 rbh
Transcriptional regulator {ECO:0000313|EMBL:CCE99607.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
SCNpilot_cont_500_bf_scaffold_4972_21
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19982..20473)
DNA (492bp) protein (164aa)
Uncharacterized protein n=2 Tax=Rhizobium leguminosarum bv. trifolii RepID=B5ZVV6_RHILW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACI57256.1}; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM2304).;"
SCNpilot_cont_500_bf_scaffold_4972_22
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20592..21743)
DNA (1152bp) protein (384aa)
Alkaline proteinase secretion protein n=2 Tax=Agrobacterium RepID=F0LBM6_AGRSH rbh
Alkaline proteinase secretion protein {ECO:0000313|EMBL:CDN92778.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
alkaline proteinase secretion protein rbh
Displaying 22 items

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