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SCNpilot_cont_500_bf_scaffold_5261

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_5261_1
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..197)
DNA (195bp) protein (65aa)
Phage head portal protein n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3IJI0_9RHIZ
Phage head portal protein {ECO:0000313|EMBL:EPE99013.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
phage portal protein, HK97 family protein
SCNpilot_cont_500_bf_scaffold_5261_2
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(427..1113)
DNA (687bp) protein (229aa)
Transcriptional regulator, PadR-like family n=1 Tax=Rhizobium sp. RepID=L0NG51_RHISP
Transcriptional regulator, PadR family {ECO:0000313|EMBL:CDN53701.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
padR; transcriptional regulator
SCNpilot_cont_500_bf_scaffold_5261_3
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1627..2292)
DNA (666bp) protein (222aa)
chitinase n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000364A2AF
Uncharacterized protein {ECO:0000313|EMBL:KEC76123.1}; TaxID=1408223 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. phaseoli CCGM1.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_5261_4
unknown

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2468..2590
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_5261_5
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2673..2798)
DNA (126bp) protein (42aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI000361737A
Large terminase {ECO:0000313|EMBL:EKF58190.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
large terminase
SCNpilot_cont_500_bf_scaffold_5261_6
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2848..3873)
DNA (1026bp) protein (342aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000366DEE9 rbh
Large terminase {ECO:0000313|EMBL:EPE99007.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
large terminase
SCNpilot_cont_500_bf_scaffold_5261_7
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3910..4491)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF080 RepID=J2HLU8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EUB95266.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_5261_8
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4713..5189)
DNA (477bp) protein (159aa)
UPF0260 protein PMI07_03500 n=1 Tax=Rhizobium sp. CF080 RepID=J2J0Y3_9RHIZ
UPF0260 protein JL39_26900 {ECO:0000256|HAMAP-Rule:MF_00676}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
hypothetical protein; K09160 hypothetical protein
SCNpilot_cont_500_bf_scaffold_5261_9
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5392..7530
DNA (2139bp) protein (713aa)
penicillin-binding protein; K05366 penicillin-binding protein 1A [EC:2.4.1.- 3.4.-.-] rbh
penicillin-binding protein 1A n=1 Tax=Rhizobium leguminosarum RepID=UPI0003758A03 rbh
Penicillin-binding protein, 1A family {ECO:0000313|EMBL:ACS55317.1}; TaxID=395491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM1325).;"
SCNpilot_cont_500_bf_scaffold_5261_10
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7572..8162
DNA (591bp) protein (197aa)
membrane protein n=1 Tax=Rhizobium mongolense RepID=UPI0003B78457
Uncharacterized protein {ECO:0000313|EMBL:EJZ20702.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_5261_11
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8155..8730
DNA (576bp) protein (192aa)
membrane protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00036FBA05
hypothetical protein
Hypothetical conserved membrane protein {ECO:0000313|EMBL:ABC90064.1}; TaxID=347834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CFN 42 / ATCC 51251).;"
SCNpilot_cont_500_bf_scaffold_5261_12
unknown

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comp(8724..8897)
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_5261_13
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9438..10421
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF142 RepID=J1T6C4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJJ27226.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_5261_14
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10446..10847)
DNA (402bp) protein (134aa)
hypothetical protein n=2 Tax=Rhizobium leguminosarum RepID=UPI000376A765
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM25906.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;"
SCNpilot_cont_500_bf_scaffold_5261_15
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10884..11054)
DNA (171bp) protein (57aa)
Peptidoglycan binding protein n=1 Tax=Agrobacterium tumefaciens 5A RepID=H0H6B6_RHIRD
peptidoglycan binding protein
Peptidoglycan binding protein {ECO:0000313|EMBL:EHJ99274.1}; TaxID=1107544 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens 5A.;"
Displaying 15 items

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