ggKbase home page

SCNpilot_cont_500_bf_scaffold_5432

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_5432_1
Brucella canis, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

150..890
DNA (741bp) protein (247aa)
Glycosyl transferase, family 25 n=80 Tax=Brucella RepID=A5VNR2_BRUO2
glycosyl transferase, family 25
Glycosyl transferase family 25 {ECO:0000313|EMBL:ABX61420.1}; TaxID=483179 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella canis (strain ATCC 23365 / NCTC 10854).;"
SCNpilot_cont_500_bf_scaffold_5432_2
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

887..1594
DNA (708bp) protein (236aa)
Polysaccharide deacetylase n=1 Tax=Achromobacter piechaudii HLE RepID=J4YFF5_9BURK
Polysaccharide deacetylase {ECO:0000313|EMBL:EJO30543.1}; TaxID=1156919 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piechaudii HLE.;"
polysaccharide deacetylase
SCNpilot_cont_500_bf_scaffold_5432_3
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1595..2230)
DNA (636bp) protein (212aa)
Putative transmembrane protein n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0Q0P3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:AJC81330.1}; TaxID=1432049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. phaseoli str. IE4803.;"
hypothetical protein; K09125 hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_5432_4
Agrobacterium sp. ATCC 31749, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2347..2649)
DNA (303bp) protein (101aa)
50S ribosomal protein L28 n=10 Tax=Rhizobium/Agrobacterium group RepID=RL28_AGRT5
rpmB; 50S ribosomal protein L28
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=82789 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. ATCC 31749.;"
SCNpilot_cont_500_bf_scaffold_5432_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2890..3663
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D3T2_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR83572.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_5432_6
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3678..4103)
DNA (426bp) protein (142aa)
cupin n=1 Tax=Rhizobium leguminosarum RepID=UPI0003670D10
Cupin 5 domain-containing protein {ECO:0000313|EMBL:AJC81325.1}; TaxID=1432049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. phaseoli str. IE4803.;"
hypothetical protein; K09705 hypothetical protein
SCNpilot_cont_500_bf_scaffold_5432_7
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4103..4873)
DNA (771bp) protein (257aa)
gloB; hydroxyacylglutathione hydrolase (EC:3.1.2.6); K01069 hydroxyacylglutathione hydrolase [EC:3.1.2.6] rbh
Hydroxyacylglutathione hydrolase {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352}; EC=3.1.2.6 {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352};; Glyoxalase II {ECO:0000256|HAMAP-Rule:MF_01374}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM1689.;"
hydroxyacylglutathione hydrolase n=1 Tax=Rhizobium leguminosarum RepID=UPI00036FBCCE rbh
SCNpilot_cont_500_bf_scaffold_5432_8
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4960..5706
DNA (747bp) protein (249aa)
Type 11 methyltransferase n=1 Tax=Rhizobium sp. CCGE 510 RepID=J6DP04_9RHIZ
Type 11 methyltransferase {ECO:0000313|EMBL:EJT03654.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
type 11 methyltransferase
SCNpilot_cont_500_bf_scaffold_5432_9
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5812..6912
DNA (1101bp) protein (367aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
hisC1; histidinol-phosphate aminotransferase (EC:2.6.1.9) rbh
Histidinol-phosphate aminotransferase n=1 Tax=Rhizobium sp. CF142 RepID=J1T1U7_9RHIZ
SCNpilot_cont_500_bf_scaffold_5432_10
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7166..7765
DNA (600bp) protein (200aa)
Protein tyrC: Cyclohexadienyl dehydrogenase (Arogenate dehydrogenase) (ADH) Prephenate dehydrogenase (PDH) {ECO:0000313|EMBL:CCF21153.1}; EC=1.3.1.12 {ECO:0000313|EMBL:CCF21153.1};; EC=1.3.1.43 {ECO:0000313|EMBL:CCF21153.1};; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
cyclohexadienyl dehydrogenase (EC:1.3.1.12); K00220 cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12]
Protein tyrC: Cyclohexadienyl dehydrogenase (Arogenate dehydrogenase) (ADH) Prephenate dehydrogenase (PDH) n=1 Tax=Rhizobium sp. RepID=L0NJ97_RHISP
SCNpilot_cont_500_bf_scaffold_5432_11
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7780..8721)
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. RepID=L0NLI7_RHISP
Uncharacterized protein {ECO:0000313|EMBL:CCF21152.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_5432_12
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8819..9352
DNA (534bp) protein (178aa)
Cation transport protein ChaC n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LN33_RHITR
cation transport protein ChaC
Cation transport protein ChaC {ECO:0000313|EMBL:AGB72647.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_5432_13
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9491..10279)
DNA (789bp) protein (263aa)
plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase; K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] rbh
Phospholipid/glycerol acyltransferase n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4FCJ8_9RHIZ rbh
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:EHS49447.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
SCNpilot_cont_500_bf_scaffold_5432_14
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10440..11054)
DNA (615bp) protein (205aa)
Putative uncharacterized protein n=1 Tax=Rhizobium etli CNPAF512 RepID=F2A507_RHIET
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGE60452.1}; TaxID=993047 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli CNPAF512.;"
Displaying 14 items

View Taxonomy