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SCNpilot_cont_500_bf_scaffold_5447

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_5447_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..537)
DNA (537bp) protein (179aa)
Putative IclR family transcriptional regulator n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EX05_9RHIZ
Putative IclR family transcriptional regulator {ECO:0000313|EMBL:EYR83437.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
IclR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_5447_2
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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695..1609
DNA (915bp) protein (305aa)
dgoK; 2-dehydro-3-deoxygalactonokinase (EC:2.7.1.58); K00883 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58]
2-dehydro-3-deoxygalactonokinase n=1 Tax=Rhizobium leguminosarum RepID=UPI000380E6EC
2-keto-3-deoxy-galactonokinase {ECO:0000313|EMBL:EJC69674.1}; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;"
SCNpilot_cont_500_bf_scaffold_5447_3
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1722..2354
DNA (633bp) protein (211aa)
2-dehydro-3-deoxy-6-phosphogalactonate aldolase (6-phospho-2-dehydro-3-deoxygalactonate aldolase) (2-oxo-3-deoxygalactonate 6-phosphate aldolase) {ECO:0000313|EMBL:CCF21429.1}; EC=4.1.2.21 {ECO:0000313|EMBL:CCF21429.1};; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
kdgA; 2-dehydro-3-deoxy-6-phosphogalactonate aldolase (EC:4.1.2.21); K01631 2-dehydro-3-deoxyphosphogalactonate aldolase [EC:4.1.2.21]
2-dehydro-3-deoxy-6-phosphogalactonate aldolase (6-phospho-2-dehydro-3-deoxygalactonate aldolase) (2-oxo-3-deoxygalactonate 6-phosphate aldolase) n=1 Tax=Rhizobium sp. RepID=L0NKK0_RHISP rbh
SCNpilot_cont_500_bf_scaffold_5447_4
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2357..3244
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A1A0_RHIFH
Gluconolactonase {ECO:0000313|EMBL:KEC81503.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_5447_5
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3490..4083
DNA (594bp) protein (198aa)
photosystem reaction center subunit H n=1 Tax=Rhizobium leguminosarum RepID=UPI000367A29B
Photosystem reaction center subunit H {ECO:0000313|EMBL:AHF82655.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM1689.;"
PRC family protein
SCNpilot_cont_500_bf_scaffold_5447_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4159..5712)
DNA (1554bp) protein (518aa)
Trimethylamine methyltransferase MttB1 {ECO:0000313|EMBL:EYR83443.1}; EC=2.1.1.250 {ECO:0000313|EMBL:EYR83443.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
mttB1; trimethylamine methyltransferase MttB (EC:2.1.1.-) rbh
Trimethylamine methyltransferase MttB1 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CY74_9RHIZ rbh
SCNpilot_cont_500_bf_scaffold_5447_7
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5821..6756
DNA (936bp) protein (312aa)
Transcription regulator protein n=2 Tax=Rhizobium meliloti RepID=K0P3K9_RHIML rbh
transcriptional regulator rbh
Putative transcription regulator protein {ECO:0000313|EMBL:EHK75056.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
SCNpilot_cont_500_bf_scaffold_5447_8
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6761..7114)
DNA (354bp) protein (118aa)
Diguanylate cyclase/phosphodiesterase n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q225_9RHIZ
Diguanylate cyclase {ECO:0000313|EMBL:KGD86134.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
Diguanylate cyclase/phosphodiesterase
Displaying 8 items

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