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SCNpilot_cont_500_bf_scaffold_5560

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_5560_1
unknown

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3..95
DNA (93bp) protein (31aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_5560_2
Ochrobactrum sp. SJY1, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(272..793)
DNA (522bp) protein (174aa)
sarcosine oxidase subunit gamma; K00305 sarcosine oxidase, subunit gamma [EC:1.5.3.1]
Putative sarcosine oxidase gamma subunit protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9DGT4_9RHIZ
Sarcosine oxidase gamma subunit {ECO:0000313|EMBL:AIH15821.1}; TaxID=1526653 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. SJY1.;"
SCNpilot_cont_500_bf_scaffold_5560_3
Ochrobactrum sp. SJY1, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(810..3773)
DNA (2964bp) protein (988aa)
soxA; sarcosine oxidase alpha subunit; K00302 sarcosine oxidase, subunit alpha [EC:1.5.3.1] rbh
sarcosine oxidase subunit alpha n=1 Tax=Rhizobium radiobacter RepID=UPI00035DC4BA rbh
Sarcosine oxidase alpha subunit {ECO:0000313|EMBL:AIH15822.1}; TaxID=1526653 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. SJY1.;"
SCNpilot_cont_500_bf_scaffold_5560_4
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3770..4042)
DNA (273bp) protein (91aa)
soxD; sarcosine oxidase delta subunit; K00304 sarcosine oxidase, subunit delta [EC:1.5.3.1]
Sarcosine oxidase delta subunit n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K1S1_AGRVS
Sarcosine oxidase delta subunit {ECO:0000313|EMBL:ACM38819.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
SCNpilot_cont_500_bf_scaffold_5560_5
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4169..5419)
DNA (1251bp) protein (417aa)
sarcosine oxidase subunit beta; K00303 sarcosine oxidase, subunit beta [EC:1.5.3.1] rbh
sarcosine oxidase subunit beta n=1 Tax=Rhizobium meliloti RepID=UPI0003803363 rbh
Sarcosine oxidase, beta subunit family {ECO:0000313|EMBL:ABR62111.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
SCNpilot_cont_500_bf_scaffold_5560_6
Agrobacterium sp. ATCC 31749, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5510..6493
DNA (984bp) protein (328aa)
AraC family transcriptional regulator n=1 Tax=Agrobacterium sp. ATCC 31749 RepID=F5JIQ2_9RHIZ rbh
AraC family transcriptional regulator {ECO:0000313|EMBL:EGL62329.1}; TaxID=82789 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. ATCC 31749.;"
glxA; AraC family transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_5560_7
unknown

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7056..7316
DNA (261bp) protein (87aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_5560_8
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7798..8247)
DNA (450bp) protein (150aa)
Predicted protein n=1 Tax=Mycobacterium tuberculosis K85 RepID=D6FRR4_MYCTU
Uncharacterized protein {ECO:0000313|EMBL:CDX34209.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_5560_9
unknown

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comp(8323..8472)
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_5560_10
R_Acidobacteria_68_18, Acidobacteria, Bacteria

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8831..9949
DNA (1119bp) protein (373aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002F0803C
multi-sensor signal transduction histidine kinase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
Displaying 10 items

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