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SCNpilot_cont_500_bf_scaffold_5576

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_5576_1
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..1326)
DNA (1326bp) protein (442aa)
ATP-dependent Clp protease, ATP-binding subunit clpA n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F8H4_9RHIZ
ATP-dependent Clp protease, ATP-binding subunit clpA {ECO:0000313|EMBL:EHS50918.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
clpA; ATP-dependent Clp protease ATP-binding subunit; K03694 ATP-dependent Clp protease ATP-binding subunit ClpA
SCNpilot_cont_500_bf_scaffold_5576_2
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1337..1690)
DNA (354bp) protein (118aa)
ATP-dependent Clp protease adapter protein ClpS n=1 Tax=Rhizobium sp. RepID=L0NFA8_RHISP
ATP-dependent Clp protease adapter protein ClpS {ECO:0000256|HAMAP-Rule:MF_00302}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
clpS; ATP-dependent Clp protease adaptor protein ClpS; K06891 ATP-dependent Clp protease adaptor protein ClpS
SCNpilot_cont_500_bf_scaffold_5576_3
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1955..2302)
DNA (348bp) protein (116aa)
Phasin family protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LI64_RHITR
phasin family protein
Phasin family protein {ECO:0000313|EMBL:AGB71078.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_5576_4
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2675..2878)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X877_RHIFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL52083.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
SCNpilot_cont_500_bf_scaffold_5576_5
Rhizobium sp. R2-400B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3047..3871)
DNA (825bp) protein (275aa)
Serine acetyltransferase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LK63_RHITR
serine acetyltransferase
Serine acetyltransferase {ECO:0000313|EMBL:KEQ10208.1}; TaxID=1509404 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R2-400B4.;"
SCNpilot_cont_500_bf_scaffold_5576_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4082..4867)
DNA (786bp) protein (262aa)
Putative hydrolase or acyltransferase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CVK9_9RHIZ rbh
Putative hydrolase or acyltransferase {ECO:0000313|EMBL:EYR79973.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative hydrolase rbh
SCNpilot_cont_500_bf_scaffold_5576_7
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5036..5284
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6U8I2_SINMW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR59962.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
SCNpilot_cont_500_bf_scaffold_5576_8
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5298..6455
DNA (1158bp) protein (386aa)
monooxygenase FAD-binding; K00480 salicylate hydroxylase [EC:1.14.13.1]
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=I9N835_RHILT
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase {ECO:0000313|EMBL:EJB02847.1}; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;"
SCNpilot_cont_500_bf_scaffold_5576_9
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6518..6934)
DNA (417bp) protein (139aa)
Putative cystathionine beta-lyase MetC {ECO:0000313|EMBL:EYR79976.1}; EC=4.4.1.8 {ECO:0000313|EMBL:EYR79976.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
metC; cystathionine beta-lyase (EC:4.4.1.8); K01760 cystathionine beta-lyase [EC:4.4.1.8]
Putative cystathionine beta-lyase MetC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ERS3_9RHIZ
SCNpilot_cont_500_bf_scaffold_5576_10
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7990..8295
DNA (306bp) protein (102aa)
General L-amino acid-binding periplasmic protein AapJ n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CUA0_9RHIZ
General L-amino acid-binding periplasmic protein AapJ {ECO:0000313|EMBL:EYR79977.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein; K09969 general L-amino acid transport system substrate-binding protein
Displaying 10 items

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