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SCNpilot_cont_500_bf_scaffold_5594

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_5594_1
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..366
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. RepID=L0NLQ6_RHISP
Uncharacterized protein {ECO:0000313|EMBL:CCF21711.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
endoribonuclease L-PSP
SCNpilot_cont_500_bf_scaffold_5594_2
Mesorhizobium sp. L2C054A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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452..2413
DNA (1962bp) protein (654aa)
UPI0003CFCA4B related cluster n=1 Tax=unknown RepID=UPI0003CFCA4B
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:ESZ51240.1}; TaxID=1287100 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C054A000.;"
peroxisomal bifunctional enzyme
SCNpilot_cont_500_bf_scaffold_5594_3
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2503..3981
DNA (1479bp) protein (493aa)
Cardiolipin synthetase n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5S3Z2_RHIET
cls; cardiolipin synthetase
Cardiolipin synthetase {ECO:0000313|EMBL:AIC30301.1}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. IE4771.;"
SCNpilot_cont_500_bf_scaffold_5594_4
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4023..4823
DNA (801bp) protein (267aa)
Endonuclease/exonuclease/phosphatase n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0Q668_9RHIZ
hypothetical protein; K06896
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:CCM79334.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium mesoamericanum STM3625.;"
SCNpilot_cont_500_bf_scaffold_5594_5
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4911..5576
DNA (666bp) protein (222aa)
GntR family transcriptional regulator n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MA04_9RHIZ rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:EKF17840.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
GntR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_5594_6
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5654..6169
DNA (516bp) protein (172aa)
BioY protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2LJC0_9RHIZ
BioY protein {ECO:0000313|EMBL:EKF17839.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
BioY protein; K03523 putative biotin biosynthesis protein BioY
SCNpilot_cont_500_bf_scaffold_5594_7
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6166..7179
DNA (1014bp) protein (338aa)
Biotin synthase {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00009987}; EC=2.8.1.6 {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00250466};; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
bioB; biotin synthase; K01012 biotin synthetase [EC:2.8.1.6] rbh
Biotin synthase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2N0R4_9RHIZ rbh
SCNpilot_cont_500_bf_scaffold_5594_8
Sodalis praecaptivus, Sodalis, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7361..8173)
DNA (813bp) protein (271aa)
Transcriptional regulator n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z137_9RHIZ
Putative transcriptional regulator {ECO:0000313|EMBL:AHF77418.1}; TaxID=1239307 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Sodalis.;" source="Sodalis praecaptivus.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_5594_9
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(8188..8853)
DNA (666bp) protein (222aa)
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1RC52_SPISS
polar amino acid ABC transporter inner membrane protein
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ADK79932.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
SCNpilot_cont_500_bf_scaffold_5594_10
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(8856..9527)
DNA (672bp) protein (224aa)
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1RC51_SPISS
polar amino acid ABC transporter inner membrane protein
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ADK79931.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
SCNpilot_cont_500_bf_scaffold_5594_11
Paenibacillus mucilaginosus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(9532..10272)
DNA (741bp) protein (247aa)
protein GlnQ; K10041 putative glutamine transport system ATP-binding protein [EC:3.6.3.-]
ABC transporter n=1 Tax=Deinococcus wulumuqiensis RepID=UPI0003608052
Amino acid ABC transporter ATPase {ECO:0000313|EMBL:AFH65461.1}; TaxID=997761 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus mucilaginosus K02.;"
SCNpilot_cont_500_bf_scaffold_5594_12
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(10347..11252)
DNA (906bp) protein (302aa)
Extracellular solute-binding protein family 3 n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1RC49_SPISS
family 3 extracellular solute-binding protein
Extracellular solute-binding protein family 3 {ECO:0000313|EMBL:ADK79929.1}; Flags: Precursor;; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
SCNpilot_cont_500_bf_scaffold_5594_13
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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11478..12665
DNA (1188bp) protein (396aa)
Putative aspartate transaminase n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TQH6_TISMK
aspC; putative aspartate transaminase
Putative aspartate transaminase {ECO:0000313|EMBL:AFK55014.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
SCNpilot_cont_500_bf_scaffold_5594_14
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12680..12976
DNA (297bp) protein (99aa)
dihydroxyacetone kinase (EC:2.7.1.29); K00863 dihydroxyacetone kinase [EC:2.7.1.29]
dihydroxyacetone kinase n=1 Tax=Pseudomonas sp. 313 RepID=UPI000302EFBF
Dihydroxyacetone kinase {ECO:0000313|EMBL:KJF72871.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
Displaying 14 items

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