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SCNpilot_cont_500_bf_scaffold_5657

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_5657_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..830
DNA (828bp) protein (276aa)
Putative xylanase/chitin deacetylase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CWE8_9RHIZ rbh
Putative xylanase/chitin deacetylase {ECO:0000313|EMBL:EYR78794.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
polysaccharide deacetylase
SCNpilot_cont_500_bf_scaffold_5657_2
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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941..1867
DNA (927bp) protein (309aa)
galactose 1-dehydrogenase; K00035 D-galactose 1-dehydrogenase [EC:1.1.1.48]
Galactose 1-dehydrogenase {ECO:0000313|EMBL:ACI54366.1}; EC=1.1.1.48 {ECO:0000313|EMBL:ACI54366.1};; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM2304).;"
Galactose 1-dehydrogenase n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM2304) RepID=B5ZWY9_RHILW
SCNpilot_cont_500_bf_scaffold_5657_3
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1954..3657
DNA (1704bp) protein (568aa)
Uncharacterized protein n=1 Tax=Achromobacter piechaudii HLE RepID=J4YEY0_9BURK rbh
Membrane protein {ECO:0000313|EMBL:KJC48274.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_5657_4
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3691..4140)
DNA (450bp) protein (150aa)
DNA polymerase III subunit chi; K02339 DNA polymerase III subunit chi [EC:2.7.7.7]
DNA polymerase III, chi subunit n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0VKD4_RHILT
DNA polymerase III, chi subunit {ECO:0000313|EMBL:EJC73243.1}; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;"
SCNpilot_cont_500_bf_scaffold_5657_5
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4143..5633)
DNA (1491bp) protein (497aa)
pepA; leucyl aminopeptidase (EC:3.4.11.1); K01255 leucyl aminopeptidase [EC:3.4.11.1]
Probable cytosol aminopeptidase n=1 Tax=Rhizobium etli CNPAF512 RepID=F2AJW7_RHIET
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; TaxID=993047 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli CNPAF512.;"
SCNpilot_cont_500_bf_scaffold_5657_6
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5861..8041
DNA (2181bp) protein (727aa)
permease n=1 Tax=Rhizobium mongolense RepID=UPI0003B6B4AF
YjgP/YjgQ family permease protein {ECO:0000313|EMBL:AJD40705.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
permease; K11720 lipopolysaccharide export system permease protein
SCNpilot_cont_500_bf_scaffold_5657_7
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8041..10371
DNA (2331bp) protein (777aa)
organic solvent tolerance n=1 Tax=Rhizobium mongolense RepID=UPI0003B56426
LPS-assembly protein LptD {ECO:0000256|HAMAP-Rule:MF_01411, ECO:0000256|SAAS:SAAS00019908}; Flags: Precursor;; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
organic solvent tolerance protein OstA; K04744 LPS-assembly protein
SCNpilot_cont_500_bf_scaffold_5657_8
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10559..11494
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. RepID=L0NDH0_RHISP rbh
Uncharacterized protein {ECO:0000313|EMBL:CCF18861.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
SurA domain-containing protein
SCNpilot_cont_500_bf_scaffold_5657_9
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11507..12034
DNA (528bp) protein (176aa)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosphohydroxy)-L-threonine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase; K00097 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UVU4_9RHIZ
Displaying 9 items

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