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SCNpilot_cont_500_bf_scaffold_5686

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_5686_1
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..2074)
DNA (2073bp) protein (691aa)
Double-strand break repair protein AddB n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HQG0_9RHIZ
Double-strand break repair helicase AddB type protein {ECO:0000313|EMBL:AJD39411.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
addB; double-strand break repair protein AddB
SCNpilot_cont_500_bf_scaffold_5686_2
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2074..2805)
DNA (732bp) protein (244aa)
Nucleotidyl transferase n=1 Tax=Rhizobium sp. RepID=L0NKG7_RHISP rbh
Nucleotidyl transferase {ECO:0000313|EMBL:CCF21578.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
putative nucleotidyl transferase protein rbh
SCNpilot_cont_500_bf_scaffold_5686_3
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2815..4326)
DNA (1512bp) protein (504aa)
chlorosome protein n=1 Tax=Rhizobium leguminosarum RepID=UPI000371F07B
hypothetical protein; K06925 UPF0079 ATP-binding protein; K07102
ATPase, YjeE family {ECO:0000313|EMBL:EJC68749.1}; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;"
SCNpilot_cont_500_bf_scaffold_5686_4
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4323..5381)
DNA (1059bp) protein (353aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
Putative two-component sensor histidine kinase protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UU72_9RHIZ
two component sensor kinase
SCNpilot_cont_500_bf_scaffold_5686_5
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5418..6821)
DNA (1404bp) protein (468aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
Histidine kinase n=1 Tax=Rhizobium sp. AP16 RepID=J2CUI8_9RHIZ
two-component sensor histidine kinase
SCNpilot_cont_500_bf_scaffold_5686_6
Rhizobium nepotum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7047..8447)
DNA (1401bp) protein (467aa)
ahcY; S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1); K01251 adenosylhomocysteinase [EC:3.3.1.1] rbh
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrolase {ECO:0000256|HAMAP-Rule:MF_00563}; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium nepotum 39/7.;"
Adenosylhomocysteinase n=2 Tax=Agrobacterium RepID=SAHH_AGRT5 rbh
SCNpilot_cont_500_bf_scaffold_5686_7
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8605..8877)
DNA (273bp) protein (91aa)
Phosphotransferase system HPr (HPr) family protein n=1 Tax=Rhizobium sp. CF142 RepID=J2LCN6_9RHIZ
Phosphotransferase system HPr (HPr) family protein {ECO:0000313|EMBL:EJJ30834.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
putative phosphotransferase system,phosphocarrier HPr protein; K11189 phosphocarrier protein
SCNpilot_cont_500_bf_scaffold_5686_8
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8898..9299)
DNA (402bp) protein (134aa)
PTS system fructose subfamily transporter subunit IIA; K02793 PTS system, mannose-specific IIA component [EC:2.7.1.69]
Phosphotransferase system, mannose/fructose-specific component IIA n=3 Tax=Rhizobium RepID=J3BIK1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCM77889.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium mesoamericanum STM3625.;"
SCNpilot_cont_500_bf_scaffold_5686_9
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9441..9896)
DNA (456bp) protein (152aa)
Serine kinase of the HPr protein, regulates carbohydrate metabolism n=1 Tax=Rhizobium sp. CF080 RepID=J3BSF6_9RHIZ
Serine kinase of the HPr protein, regulates carbohydrate metabolism {ECO:0000313|EMBL:CDN56338.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
HPr kinase
SCNpilot_cont_500_bf_scaffold_5686_10
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9898..10506)
DNA (609bp) protein (203aa)
integral membrane sensor signal transduction histidine kinase; K14980 two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
Integral membrane sensor signal transduction histidine kinase n=2 Tax=Sinorhizobium medicae RepID=A6UEJ5_SINMW
Displaying 10 items

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