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SCNpilot_cont_500_bf_scaffold_5852

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_5852_1
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..644
DNA (642bp) protein (214aa)
AraC family transcriptional regulator n=1 Tax=Rhizobium leguminosarum RepID=UPI00036D83EA
DNA-binding domain-containing protein, AraC-type {ECO:0000313|EMBL:EJC64024.1}; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;"
AraC type helix-turn-helix-domain containing protein
SCNpilot_cont_500_bf_scaffold_5852_2
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(623..1762)
DNA (1140bp) protein (380aa)
D-aminopeptidase {ECO:0000313|EMBL:CAA66259.1}; EC=3.4.11.19 {ECO:0000313|EMBL:CAA66259.1};; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
D-aminopeptidase n=1 Tax=Ochrobactrum anthropi RepID=Q59632_OCHAN
peptidase S58 DmpA
SCNpilot_cont_500_bf_scaffold_5852_3
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1764..2594)
DNA (831bp) protein (277aa)
Ornithine carbamoyltransferase {ECO:0000313|EMBL:ABS15514.1}; EC=2.1.3.3 {ECO:0000313|EMBL:ABS15514.1};; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
Ornithine carbamoyltransferase n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X2R0_OCHA4 rbh
ornithine carbamoyltransferase; K11070 spermidine/putrescine transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_5852_4
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2606..3505)
DNA (900bp) protein (300aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X2Q9_OCHA4 rbh
binding-protein-dependent transport systems inner membrane component; K11071 spermidine/putrescine transport system permease protein rbh
Spermidine/putrescine ABC transporter permease {ECO:0000313|EMBL:EXL03109.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
SCNpilot_cont_500_bf_scaffold_5852_5
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3502..4593)
DNA (1092bp) protein (364aa)
spermidine/putrescine ABC transporter ATPase; K11072 spermidine/putrescine transport system ATP-binding protein [EC:3.6.3.31] rbh
spermidine/putrescine ABC transporter ATPase n=1 Tax=Ochrobactrum anthropi RepID=UPI000287E8F4 rbh
Spermidine/putrescine ABC transporter ATPase subunit {ECO:0000313|EMBL:ABS15512.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
SCNpilot_cont_500_bf_scaffold_5852_6
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4757..5803
DNA (1047bp) protein (349aa)
Putrescine-binding periplasmic protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V1G4_9RHIZ
Putrescine-binding periplasmic protein {ECO:0000256|PIRNR:PIRNR019574}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
extracellular solute-binding protein; K11069 spermidine/putrescine transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_5852_7
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5865..6713
DNA (849bp) protein (283aa)
Transcriptional regulator, RpiR family n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X2Q6_OCHA4
RpiR family transcriptional regulator
RpiR family transcriptional regulator {ECO:0000313|EMBL:EXL03106.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
Displaying 7 items

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