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SCNpilot_cont_500_bf_scaffold_5858

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_5858_1
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..1041)
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI0003738DA3 rbh
Uncharacterized protein {ECO:0000313|EMBL:AHK45092.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_5858_2
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1035..2945)
DNA (1911bp) protein (637aa)
ATPase AAA n=1 Tax=Rhizobium meliloti RepID=UPI00036D8ECF rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CDH86446.1}; TaxID=1401243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti RU11/001.;"
SCNpilot_cont_500_bf_scaffold_5858_3
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2950..3312)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3MFR2_RHISN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL53262.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
SCNpilot_cont_500_bf_scaffold_5858_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4129..5217)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3MFR3_RHISN rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR83484.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_5858_5
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5344..5727)
DNA (384bp) protein (128aa)
Cytochrome-c protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9J7U2_AGRRK
cytochrome-c protein; K08738 cytochrome c
Cytochrome C {ECO:0000313|EMBL:KEA06142.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
SCNpilot_cont_500_bf_scaffold_5858_6
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5929..6885
DNA (957bp) protein (319aa)
glycine/betaine ABC transporter substrate-binding protein n=1 Tax=Rhizobium giardinii RepID=UPI000381A275 rbh
Proline/glycine betaine ABC transporter, substrate-binding protein {ECO:0000313|EMBL:AHK45098.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
choline ABC transporter periplasmic binding protein; K02002 glycine betaine/proline transport system substrate-binding protein rbh
SCNpilot_cont_500_bf_scaffold_5858_7
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6965..7810
DNA (846bp) protein (282aa)
glycine/betaine ABC transporter permease n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI0003782902 rbh
proW; proline/glycine betaine ABC transporter permease; K02001 glycine betaine/proline transport system permease protein rbh
Glycine betaine transport system permease protein opuAB {ECO:0000313|EMBL:CCM76553.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium mesoamericanum STM3625.;"
SCNpilot_cont_500_bf_scaffold_5858_8
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7807..8856
DNA (1050bp) protein (350aa)
opuA; glycine betaine/L-proline ABC transporter,ATP-binding protein, putative; K02000 glycine betaine/proline transport system ATP-binding protein [EC:3.6.3.32] rbh
Glycine betaine/L-proline transport ATP-binding protein ProV n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ERD1_9RHIZ rbh
Glycine betaine/L-proline transport ATP-binding protein ProV {ECO:0000313|EMBL:EYR83489.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
SCNpilot_cont_500_bf_scaffold_5858_9
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9021..9776
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. RepID=L0NH15_RHISP
Uncharacterized protein {ECO:0000313|EMBL:CCF20121.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein; K07226 hypothetical protein
SCNpilot_cont_500_bf_scaffold_5858_10
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9983..10297
DNA (315bp) protein (105aa)
Putative transcriptional regulator n=1 Tax=Rhizobium sp. CF080 RepID=J2JNG3_9RHIZ
Nodulation protein NolR {ECO:0000313|EMBL:CDN48757.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
nolR; transcriptional regulator ArsR family
Displaying 10 items

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