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SCNpilot_cont_500_bf_scaffold_7093

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_7093_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..1234)
DNA (1233bp) protein (411aa)
cysteine desulfurase n=1 Tax=Rhizobium giardinii RepID=UPI00037CB9E1 rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR82265.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
cytochrome c heme-binding site
SCNpilot_cont_500_bf_scaffold_7093_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1374..2330
DNA (957bp) protein (319aa)
Transcriptional regulator, LysR family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C162_9RHIZ rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EYR82266.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
transcriptional regulator, LysR family
SCNpilot_cont_500_bf_scaffold_7093_3
Brucella suis, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2340..2675)
DNA (336bp) protein (112aa)
plasmid stabilization protein ParE n=1 Tax=Rhizobium mongolense RepID=UPI0003B6C9AD
plasmid stabilization system protein
Plasmid stabilization system {ECO:0000313|EMBL:ABY37523.1}; TaxID=470137 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella suis (strain ATCC 23445 / NCTC 10510).;"
SCNpilot_cont_500_bf_scaffold_7093_4
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2672..2932)
DNA (261bp) protein (87aa)
Hypothetical conserved protein n=1 Tax=Rhizobium etli (strain CIAT 652) RepID=B3Q3V2_RHIE6
hypothetical protein
Hypothetical conserved protein {ECO:0000313|EMBL:ACE94962.1}; TaxID=491916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CIAT 652).;"
SCNpilot_cont_500_bf_scaffold_7093_5
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3009..3854)
DNA (846bp) protein (282aa)
Xanthine dehydrogenase accessory protein XdhC Genetic Information Processing n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U4V8_9RHIZ
Xanthine dehydrogenase accessory protein XdhC Genetic Information Processing {ECO:0000313|EMBL:ENN85358.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
xdhC; xanthine dehydrogenase accessory protein XdhC
SCNpilot_cont_500_bf_scaffold_7093_6
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3861..5675)
DNA (1815bp) protein (605aa)
Xanthine dehydrogenase molybdopterin binding protein subunit n=1 Tax=Rhizobium freirei PRF 81 RepID=N6TY74_9RHIZ
Xanthine dehydrogenase molybdopterin binding protein subunit {ECO:0000313|EMBL:ENN85359.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
xdhB2; xanthine dehydrogenase, molybdopterin binding subunit
SCNpilot_cont_500_bf_scaffold_7093_7
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6129..7613)
DNA (1485bp) protein (495aa)
Xanthine dehydrogenase, xdhA n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UUJ6_9RHIZ
Xanthine dehydrogenase, xdhA {ECO:0000313|EMBL:ENN85360.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
xdhA2; xanthine dehydrogenase, small subunit
SCNpilot_cont_500_bf_scaffold_7093_8
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7617..7982)
DNA (366bp) protein (122aa)
5-hydroxyisourate hydrolase {ECO:0000256|RuleBase:RU361270}; Short=HIU hydrolase {ECO:0000256|RuleBase:RU361270};; Short=HIUHase {ECO:0000256|RuleBase:RU361270};; EC=3.5.2.17 {ECO:0000256|RuleBase:RU361270};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
5-hydroxyisourate hydrolase 1 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CVE9_9RHIZ
uraH2; hydroxyisourate hydrolase
SCNpilot_cont_500_bf_scaffold_7093_9
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8148..8582
DNA (435bp) protein (145aa)
2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase {ECO:0000313|EMBL:EYR82273.1}; EC=4.1.1.n1 {ECO:0000313|EMBL:EYR82273.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
uricase (EC:1.7.3.3)
2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZY9_9RHIZ
SCNpilot_cont_500_bf_scaffold_7093_10
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8579..9478
DNA (900bp) protein (300aa)
2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase {ECO:0000313|EMBL:EYR82273.1}; EC=4.1.1.n1 {ECO:0000313|EMBL:EYR82273.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZY9_9RHIZ
probabable chitooligosaccharide deacetylase
SCNpilot_cont_500_bf_scaffold_7093_11
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9591..10076
DNA (486bp) protein (162aa)
Ureidoglycolate lyase {ECO:0000256|HAMAP-Rule:MF_00616, ECO:0000256|SAAS:SAAS00181913}; EC=4.3.2.3 {ECO:0000256|HAMAP-Rule:MF_00616, ECO:0000256|SAAS:SAAS00181913};; Ureidoglycolatase {ECO:0000256|HAMAP-Rule:MF_00616}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Ureidoglycolate lyase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CB08_9RHIZ rbh
allA2; ureidoglycolate hydrolase
SCNpilot_cont_500_bf_scaffold_7093_12
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10520..11134)
DNA (615bp) protein (205aa)
Xanthine uracil permease n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CR00_9RHIZ
Xanthine uracil permease {ECO:0000313|EMBL:EYR79822.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
xanthine/uracil/vitamin C permease; K06901 putative MFS transporter, AGZA family, xanthine/uracil permease
Displaying 12 items

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