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SCNpilot_cont_500_bf_scaffold_7171

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_7171_1
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..154)
DNA (153bp) protein (51aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:CDN47827.1}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
Signal transduction histidine kinase n=1 Tax=Rhizobium sp. CF080 RepID=J3BXI8_9RHIZ
integral membrane sensor signal transduction histidine kinase
SCNpilot_cont_500_bf_scaffold_7171_2
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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270..839
DNA (570bp) protein (190aa)
Micrococcal nuclease-like nuclease n=1 Tax=Rhizobium sp. AP16 RepID=J2DGZ0_9RHIZ
Micrococcal nuclease-like nuclease {ECO:0000313|EMBL:EJK82057.1}; Flags: Precursor;; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
exoI; succinoglycan biosynthesis protein
SCNpilot_cont_500_bf_scaffold_7171_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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836..1465
DNA (630bp) protein (210aa)
Uracil-DNA glycosylase protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EY75_9RHIZ
Uracil-DNA glycosylase protein {ECO:0000313|EMBL:EYR83708.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
uracil-DNA glycosylase
SCNpilot_cont_500_bf_scaffold_7171_4
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1532..2020
DNA (489bp) protein (163aa)
Transcriptional regulator, AsnC family n=8 Tax=Rhizobium/Agrobacterium group RepID=A9CIH8_AGRT5 rbh
AsnC family transcriptional regulator; K05800 Lrp/AsnC family transcriptional regulator rbh
Transcriptional regulator, AsnC family protein {ECO:0000313|EMBL:EMS97185.1}; TaxID=1281779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens str. Cherry 2E-2-2.;"
SCNpilot_cont_500_bf_scaffold_7171_5
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2242..3021
DNA (780bp) protein (260aa)
cobS1; cobalamin synthase (EC:2.-.-.-)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
Cobalamin synthase n=1 Tax=Sinorhizobium meliloti Rm41 RepID=K0P4T6_RHIML
SCNpilot_cont_500_bf_scaffold_7171_6
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3071..3292
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Ensifer adhaerens RepID=I0FX79_ENSAD
Fe-S oxidoreductase {ECO:0000313|EMBL:KDP74589.1}; Uncharacterized protein {ECO:0000313|EMBL:BAL73116.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
hypothetical protein; K06938
SCNpilot_cont_500_bf_scaffold_7171_7
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3289..3993
DNA (705bp) protein (235aa)
Clan AA aspartic protease, TIGR02281 family n=1 Tax=Rhizobium sp. CF142 RepID=J1TCT1_9RHIZ
Clan AA aspartic protease, TIGR02281 family {ECO:0000313|EMBL:EJJ29591.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
hypothetical protein; K06985 aspartyl protease family protein
SCNpilot_cont_500_bf_scaffold_7171_8
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3994..4755)
DNA (762bp) protein (254aa)
Putative membrane protein n=1 Tax=Rhizobium sp. CF142 RepID=J2L9B4_9RHIZ
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
ABC transporter permease protein
SCNpilot_cont_500_bf_scaffold_7171_9
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4752..5684)
DNA (933bp) protein (311aa)
multidrug ABC transporter ATP-binding protein n=1 Tax=Rhizobium mongolense RepID=UPI0003B5003A
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AJD41532.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
hndI; multidrug ABC transporter; K09687 antibiotic transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_7171_10
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5712..7001)
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0W3P5_RHILT rbh
Uncharacterized protein {ECO:0000313|EMBL:EJC79743.1}; Flags: Precursor;; TaxID=754762 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2297.;"
extensin
SCNpilot_cont_500_bf_scaffold_7171_11
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7294..7683
DNA (390bp) protein (130aa)
acyl-CoA hydrolase protein; K10806 acyl-CoA thioesterase YciA [EC:3.1.2.-]
Predicted acyl-CoA hydrolase protein n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3MDJ2_RHISN
Acyl-CoA hydrolase {ECO:0000313|EMBL:KEC78129.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
SCNpilot_cont_500_bf_scaffold_7171_12
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7813..8544
DNA (732bp) protein (244aa)
Excinuclease ABC subunit B (Fragment) n=1 Tax=Rhizobium sp. Pop5 RepID=K0VF89_9RHIZ
Excinuclease ABC subunit B {ECO:0000313|EMBL:EJZ17551.1}; Flags: Fragment;; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;"
uvrB; excinuclease ABC subunit B; K03702 excinuclease ABC subunit B
Displaying 12 items

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