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SCNpilot_cont_500_bf_scaffold_7638

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_7638_1
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..2215)
DNA (2214bp) protein (738aa)
Glucose dehydrogenase {ECO:0000313|EMBL:KGD95026.1}; EC=1.1.5.2 {ECO:0000313|EMBL:KGD95026.1};; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
gcd; Quinoprotein glucose dehydrogenase (EC:1.1.5.2) rbh
Membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family n=1 Tax=Rhizobium sp. CF080 RepID=J2R091_9RHIZ rbh
SCNpilot_cont_500_bf_scaffold_7638_2
unknown

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comp(2407..2583)
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_7638_3
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2656..3666)
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI0003742884 rbh
GGDEF domain protein {ECO:0000313|EMBL:KFC71284.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
NMT1/THI5 like domain-containing protein; K15598 putative hydroxymethylpyrimidine transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_7638_4
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3666..4277)
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI0003707548
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KKB06902.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
ABC transporter; K15600 putative hydroxymethylpyrimidine transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_7638_5
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4271..5158)
DNA (888bp) protein (296aa)
ABC transporter permease n=1 Tax=Mesorhizobium sp. LNJC394B00 RepID=V7G8Q8_9RHIZ
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CDX21719.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
binding-protein-dependent transport systems inner membrane component; K15599 putative hydroxymethylpyrimidine transport system permease protein
SCNpilot_cont_500_bf_scaffold_7638_6
Mesorhizobium sp. LNJC394B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5189..5632)
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000370F04F
Uncharacterized protein {ECO:0000313|EMBL:ESY25439.1}; TaxID=1287274 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC394B00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_7638_7
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5863..6087)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM2304) RepID=B5ZU05_RHILW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACI55564.1}; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM2304).;"
SCNpilot_cont_500_bf_scaffold_7638_8
Paracoccus sp. 10990, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6142..6969)
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI00037882F2 rbh
IclR family transcriptional regulator {ECO:0000313|EMBL:KGJ19525.1}; TaxID=1525716 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 10990.;"
IclR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_7638_9
Paracoccus sp. 10990, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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7102..7839
DNA (738bp) protein (246aa)
oxidoreductase n=1 Tax=Meganema perideroedes RepID=UPI000372B081 rbh
Oxidoreductase {ECO:0000313|EMBL:KGJ19524.1}; TaxID=1525716 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 10990.;"
short-chain dehydrogenase/reductase SDR rbh
SCNpilot_cont_500_bf_scaffold_7638_10
Paracoccus halophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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7874..8704
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI00036FE3FE rbh
Amidohydrolase {ECO:0000313|EMBL:KGJ04646.1}; TaxID=376733 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus halophilus.;"
amidohydrolase 2; K07046
SCNpilot_cont_500_bf_scaffold_7638_11
Paracoccus halophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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8701..10206
DNA (1506bp) protein (502aa)
Monosaccharide-transporting ATPase {ECO:0000256|SAAS:SAAS00041637}; EC=3.6.3.17 {ECO:0000256|SAAS:SAAS00041637};; TaxID=376733 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus halophilus.;"
sugar ABC transporter ATPase; K10441 ribose transport system ATP-binding protein [EC:3.6.3.17] rbh
ABC sugar transporter, ATPase subunit protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CIL9_9RHOB rbh
SCNpilot_cont_500_bf_scaffold_7638_12
Paracoccus halophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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10232..10993
DNA (762bp) protein (254aa)
ribose ABC transporter permease n=1 Tax=Pannonibacter phragmitetus RepID=UPI00036086E6 rbh
Ribose ABC transporter permease {ECO:0000313|EMBL:KGJ04644.1}; TaxID=376733 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus halophilus.;"
sugar ABC transporter permease; K10440 ribose transport system permease protein rbh
Displaying 12 items

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