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SCNpilot_cont_500_bf_scaffold_7642

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_7642_1
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..1607
DNA (1605bp) protein (535aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB11063.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
SCNpilot_cont_500_bf_scaffold_7642_2
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1611..2513)
DNA (903bp) protein (301aa)
group 2 family glycosyl transferase (EC:2.-.-.-); K01043 [EC:2.-.-.-] rbh
Glycosyl transferase n=1 Tax=Rhizobium sp. CF080 RepID=J2K084_9RHIZ rbh
Glycosyl transferase family 2 {ECO:0000313|EMBL:EUB94921.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
SCNpilot_cont_500_bf_scaffold_7642_3
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2513..3073)
DNA (561bp) protein (187aa)
CysE/LacA/LpxA/NodL family acetyltransferase; K03818 putative colanic acid biosynthesis acetyltransferase WcaF [EC:2.3.1.-]
CysE/LacA/LpxA/NodL family acetyltransferase n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UTR3_PSEUP
CysE/LacA/LpxA/NodL family acetyltransferase {ECO:0000313|EMBL:AER56166.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
SCNpilot_cont_500_bf_scaffold_7642_4
Exiguobacterium sp. S17, Exiguobacterium, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3063..4184)
DNA (1122bp) protein (374aa)
Glycosyl transferases group 1 family protein n=1 Tax=Exiguobacterium sp. S17 RepID=S3FBA8_9BACL
Glycosyl transferases group 1 family protein {ECO:0000313|EMBL:EPE60397.1}; TaxID=856854 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XII. Incertae Sedis; Exiguobacterium.;" source="Exiguobacterium sp. S17.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_7642_5
unknown

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comp(4177..4899)
DNA (723bp) protein (241aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_7642_6
Rhizobium sp. R1-200B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5343..6626)
DNA (1284bp) protein (428aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B6E1ED
Uncharacterized protein {ECO:0000313|EMBL:KEQ06780.1}; TaxID=1509405 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R1-200B4.;"
polysaccharide biosynthesis protein
SCNpilot_cont_500_bf_scaffold_7642_7
Leisingera sp. ANG1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6627..7679)
DNA (1053bp) protein (351aa)
hypothetical protein n=1 Tax=Phaeobacter gallaeciensis RepID=UPI000377DD08
Uncharacterized protein {ECO:0000313|EMBL:KID07523.1}; TaxID=1002340 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG1.;"
SCNpilot_cont_500_bf_scaffold_7642_8
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7687..8949)
DNA (1263bp) protein (421aa)
Glycosyltransferase n=1 Tax=Rhizobium sp. CF080 RepID=J2T676_9RHIZ rbh
Colanic acid biosynthesis glycosyl transferase WcaI {ECO:0000313|EMBL:CDN53521.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
group 1 glycosyl transferase; K03208 colanic acid biosynthesis glycosyl transferase WcaI rbh
SCNpilot_cont_500_bf_scaffold_7642_9
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8946..9905)
DNA (960bp) protein (320aa)
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956, ECO:0000313|EMBL:CDN53520.1}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
NAD-dependent epimerase/dehydratase; K02377 GDP-L-fucose synthase [EC:1.1.1.271] rbh
GDP-L-fucose synthase n=1 Tax=Rhizobium sp. CF080 RepID=J3CKS5_9RHIZ rbh
SCNpilot_cont_500_bf_scaffold_7642_10
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10370..10987
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI000372E086
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:EJN02118.1}; Flags: Precursor;; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
two component response regulator
SCNpilot_cont_500_bf_scaffold_7642_11
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11068..12390
DNA (1323bp) protein (441aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
two component sensor kinase; K02484 two-component system, OmpR family, sensor kinase [EC:2.7.13.3] rbh
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI000363C6A4 rbh
SCNpilot_cont_500_bf_scaffold_7642_12
Rhizobium sp. R1-200B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12421..13125)
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00036922AD
Protein tyrosine phosphatase {ECO:0000313|EMBL:KEQ03521.1}; TaxID=1509405 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R1-200B4.;"
tyrosine/serine protein phosphatase
Displaying 12 items

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