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SCNpilot_cont_500_bf_scaffold_2781

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2781_1
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..553
DNA (552bp) protein (184aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=1281779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens str. Cherry 2E-2-2.;"
pnpA; polynucleotide phosphorylase (EC:2.7.7.8); K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Polyribonucleotide nucleotidyltransferase n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8B7J5_RHIRD
SCNpilot_cont_500_bf_scaffold_2781_2
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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635..1645
DNA (1011bp) protein (337aa)
Methyltransferase small n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LEI6_RHITR
methyltransferase small
Methyltransferase small {ECO:0000313|EMBL:AGB69537.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_2781_3
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1708..2514)
DNA (807bp) protein (269aa)
enoyl-ACP reductase; K00208 enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9] rbh
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094};; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
Enoyl-[acyl-carrier-protein] reductase [NADH] n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UF36_SINMW rbh
SCNpilot_cont_500_bf_scaffold_2781_4
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2521..3741)
DNA (1221bp) protein (407aa)
3-oxoacyl-(Acyl carrier protein) synthase I {ECO:0000313|EMBL:EPF00196.1}; EC=2.3.1.41 {ECO:0000313|EMBL:EPF00196.1};; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
fabB; 3-oxoacyl-ACP synthase (EC:2.3.1.41) rbh
3-oxoacyl-(Acyl carrier protein) synthase I n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HQV2_9RHIZ rbh
SCNpilot_cont_500_bf_scaffold_2781_5
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3789..4304)
DNA (516bp) protein (172aa)
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00405, ECO:0000256|SAAS:SAAS00064161}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00405, ECO:0000256|SAAS:SAAS00064166};; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA {ECO:0000256|HAMAP-Rule:MF_00405}; Beta-hydroxydecanoyl thioester dehydrase {ECO:0000256|HAMAP-Rule:MF_00405}; Trans-2-decenoyl-[acyl-carrier-protein] isomerase {ECO:0000256|HAMAP-Rule:MF_00405}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacte
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UUF7_9RHIZ
fabA; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase
SCNpilot_cont_500_bf_scaffold_2781_6
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4597..5016
DNA (420bp) protein (140aa)
Fur family transcriptional regulator n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI0003704055
ferric-uptake regulator protein
Fe2+/Zn2+ uptake regulation protein {ECO:0000313|EMBL:EJL51774.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
SCNpilot_cont_500_bf_scaffold_2781_7
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5106..5579
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens 5A RepID=H0HA10_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:EHJ98001.1}; TaxID=1107544 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens 5A.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2781_8
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5586..6371)
DNA (786bp) protein (262aa)
membrane protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI0003612BCD
Membrane protein {ECO:0000313|EMBL:KDP70741.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_2781_9
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6382..7572)
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CF82_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR84133.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_2781_10
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7663..8358)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UUF2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN84411.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2781_11
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8635..9876
DNA (1242bp) protein (414aa)
Adenylate cyclase protein {ECO:0000313|EMBL:AJD42720.1}; EC=4.6.1.1 {ECO:0000313|EMBL:AJD42720.1};; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
cyaG2; Putative adenylate cyclase (EC:4.6.1.1)
Putative adenylate cyclase n=1 Tax=Sinorhizobium meliloti 2011 RepID=M4MQP9_RHIML
SCNpilot_cont_500_bf_scaffold_2781_12
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9873..11777)
DNA (1905bp) protein (635aa)
Probable potassium transport system protein kup n=1 Tax=Rhizobium sp. Pop5 RepID=K0VUU5_9RHIZ rbh
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;"
kup3; Kup3 Potassium uptake protein rbh
SCNpilot_cont_500_bf_scaffold_2781_13
Oceanibulbus indolifex, Oceanibulbus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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12072..12428
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9EGF2_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EDQ02983.1}; TaxID=391624 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanibulbus.;" source="Oceanibulbus indolifex HEL-45.;"
Displaying 13 items

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