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SCNpilot_cont_500_bf_scaffold_2823

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2823_1
Mycobacterium vulneris, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..739)
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036AA32B
Spermidine/putrescine-binding periplasmic protein {ECO:0000313|EMBL:CDO27856.1}; Flags: Precursor;; TaxID=547163 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium vulneris.;"
spermidine/putrescine transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_2823_2
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(823..1425)
DNA (603bp) protein (201aa)
ABC transporter n=1 Tax=Variovorax paradoxus RepID=UPI00036C16CF
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KKB84439.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
spermidine/putrescine ABC transporter ATPase subunit; K02052 putative spermidine/putrescine transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_2823_3
R_Gammaproteobacteria_60_43, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1425..1814)
DNA (390bp) protein (130aa)
ABC transporter n=1 Tax=Pseudomonas mendocina RepID=UPI0003799104
spermidine/putrescine ABC transporter ATPase
Tax=RIFCSPHIGHO2_02_FULL_Gammaproteobacteria_60_43_curated
SCNpilot_cont_500_bf_scaffold_2823_4
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(2169..3047)
DNA (879bp) protein (293aa)
Transcriptional regulator, LacI family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCE9_CONWI
LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ADB49422.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_cont_500_bf_scaffold_2823_5
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3399..5675
DNA (2277bp) protein (759aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B8M6_STRRD rbh
L-carnitine dehydratase/bile acid-inducible protein F rbh
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:ACZ87836.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
SCNpilot_cont_500_bf_scaffold_2823_6
Mesorhizobium sp. LNJC372A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5703..6530
DNA (828bp) protein (276aa)
NADPH dependend quinone reductase n=1 Tax=Rhizobium mongolense RepID=UPI0003B72344 rbh
NADPH dependend quinone reductase {ECO:0000313|EMBL:ESY50735.1}; TaxID=1287256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC372A00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2823_7
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6596..7399
DNA (804bp) protein (268aa)
3-hydroxybutyrate dehydrogenase n=1 Tax=Rhizobium mongolense RepID=UPI0003B45FFF rbh
3-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:AIB15730.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
D-beta-hydroxybutyrate dehydrogenase (BDH) (3-hydroxybutyrate dehydrogenase) (3-HBDH)
SCNpilot_cont_500_bf_scaffold_2823_8
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7450..7899
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Rhizobium mongolense RepID=UPI0003B77C5B
thioesterase superfamily protein
Thioesterase superfamily protein {ECO:0000313|EMBL:AGS26555.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;"
SCNpilot_cont_500_bf_scaffold_2823_9
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8057..8206)
DNA (150bp) protein (50aa)
Alcohol dehydrogenase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LS66_RHITR
alcohol dehydrogenase
Alcohol dehydrogenase {ECO:0000313|EMBL:AGB74062.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_2823_10
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8843..9193
DNA (351bp) protein (117aa)
Putative transposase-related protein n=1 Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=Q1M9N0_RHIL3
putative transposase-related protein
Putative transposase-related protein {ECO:0000313|EMBL:CAK11688.1}; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae (strain 3841).;"
SCNpilot_cont_500_bf_scaffold_2823_11
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9253..10890
DNA (1638bp) protein (546aa)
Putative insertion sequence transposase protein, IS66 family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5BXE3_9RHIZ rbh
Transposase {ECO:0000313|EMBL:EYR82754.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
IS66 family insertion sequence transposase protein rbh
SCNpilot_cont_500_bf_scaffold_2823_12
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10845..11189
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EFA0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR82753.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2823_13
unknown

Not on your lists

comp(11443..11595)
DNA (153bp) protein (51aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2823_14
Rhodovulum sulfidophilum, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11731..12168)
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036539E6
Polyketide cyclase / dehydrase and lipid transport {ECO:0000313|EMBL:BAQ69629.1}; TaxID=35806 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sulfidophilum (Rhodobacter sulfidophilus).;"
polyketide cyclase/dehydrase
SCNpilot_cont_500_bf_scaffold_2823_15
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12276..13109)
DNA (834bp) protein (278aa)
Uncharacterized protein n=2 Tax=Rhodospirillum rubrum RepID=Q2RQL8_RHORT rbh
uncharacterized protein y4oV-like rbh
Uncharacterized protein {ECO:0000313|EMBL:ABC23577.1}; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG; 4362 / NCIB 8255 / S1).;"
SCNpilot_cont_500_bf_scaffold_2823_16
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13099..14313)
DNA (1215bp) protein (405aa)
hypothetical protein n=1 Tax=Ancylobacter sp. FA202 RepID=UPI000370B140
hypothetical protein rbh
UPF0261 protein L533_3509 {ECO:0000256|HAMAP-Rule:MF_00677}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica OSU553.;"
SCNpilot_cont_500_bf_scaffold_2823_17
Amycolatopsis azurea, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14324..15220)
DNA (897bp) protein (299aa)
Sugar ABC transporter permease protein n=1 Tax=Amycolatopsis azurea DSM 43854 RepID=M2PQ17_9PSEU
simple sugar transport system permease protein
Sugar ABC transporter permease protein {ECO:0000313|EMBL:EMD26658.1}; TaxID=1238180 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis azurea DSM 43854.;"
SCNpilot_cont_500_bf_scaffold_2823_18
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15217..15507)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000376D4A8
ABC transporter permease {ECO:0000313|EMBL:KGM31756.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
inner-membrane translocator; K02057 simple sugar transport system permease protein
SCNpilot_cont_500_bf_scaffold_2823_19
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16136..17641)
DNA (1506bp) protein (502aa)
sugar ABC transporter ATP-binding protein; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17]
ABC transporter, ATP-binding protein n=1 Tax=Streptomyces turgidiscabies Car8 RepID=L7EY93_9ACTO
Heme ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGM31759.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
SCNpilot_cont_500_bf_scaffold_2823_20
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17660..18679)
DNA (1020bp) protein (340aa)
Basic membrane lipoprotein n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM2304) RepID=B6A5E4_RHILW
Lipoprotein {ECO:0000313|EMBL:KGM31760.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
basic membrane lipoprotein; K07335 basic membrane protein A and related proteins
SCNpilot_cont_500_bf_scaffold_2823_21
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18738..19577)
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036D3A39
Uncharacterized protein {ECO:0000313|EMBL:KFL29498.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_500_bf_scaffold_2823_22
Streptomyces vietnamensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19687..21081
DNA (1395bp) protein (465aa)
hypothetical protein n=1 Tax=Streptomyces sp. CNB091 RepID=UPI0003713651 rbh
Uncharacterized protein {ECO:0000313|EMBL:AJF63903.1}; TaxID=362257 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces vietnamensis.;"
GntR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_2823_23
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21095..21469)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C2R7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM76119.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
cupin domain-containing protein
SCNpilot_cont_500_bf_scaffold_2823_24
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21638..22246)
DNA (609bp) protein (203aa)
Betaine aldehyde dehydrogenase 2, mitochondrial n=1 Tax=Sinorhizobium meliloti Rm41 RepID=K0P4A9_RHIML
Betaine aldehyde dehydrogenase {ECO:0000313|EMBL:AHK47054.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
aldehyde dehydrogenase
SCNpilot_cont_500_bf_scaffold_2823_25
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22613..24106)
DNA (1494bp) protein (498aa)
Glycine betaine/proline ABC transporter, permease protein, putative n=1 Tax=Roseovarius sp. TM1035 RepID=A6E5Z2_9RHOB rbh
Putative Glycine betaine/proline ABC transporter, permease protein {ECO:0000313|EMBL:CDX36419.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
putative glycine/L-proline transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_2823_26
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24103..25194)
DNA (1092bp) protein (364aa)
Glycine betaine/proline ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CDX36416.1}; EC=3.6.3.32 {ECO:0000313|EMBL:CDX36416.1};; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
proV; glycine betaine/L-proline ABC transporter ATPase; K02000 glycine betaine/proline transport system ATP-binding protein [EC:3.6.3.32]
glycine/betaine ABC transporter n=1 Tax=Phaeobacter gallaeciensis RepID=UPI0002EBDF84 rbh
SCNpilot_cont_500_bf_scaffold_2823_27
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25207..26172)
DNA (966bp) protein (322aa)
Glycine betaine/proline ABC transporter, periplasmic substrate-binding protein n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CV73_9RHOB
Glycine betaine/proline ABC transporter, periplasmic substrate-binding protein {ECO:0000313|EMBL:CDX36413.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
glycine betaine ABC transporter substrate binding protein; K02002 glycine betaine/proline transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_2823_28
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26283..27644)
DNA (1362bp) protein (454aa)
trimethylamine methyltransferase subfamily protein; K14083 trimethylamine methyltransferase [EC:2.1.1.-]
Uncharacterized protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EWH9_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX36422.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
SCNpilot_cont_500_bf_scaffold_2823_29
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27631..30249)
DNA (2619bp) protein (873aa)
Dimethylglycine dehydrogenase, mitochondrial {ECO:0000313|EMBL:CDX36425.1}; EC=1.5.8.4 {ECO:0000313|EMBL:CDX36425.1};; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
Dimethylglycine dehydrogenase n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EWH7_9RHOB rbh
dimethylglycine dehydrogenase
SCNpilot_cont_500_bf_scaffold_2823_30
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30252..32690)
DNA (2439bp) protein (813aa)
Putative oxidoreductase protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4F0D4_9RHOB rbh
Putative oxidoreductase protein {ECO:0000313|EMBL:CDX36428.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
FAD dependent oxidoreductase
Displaying items 1-30 of 31 in total

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