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SCNpilot_cont_500_bf_scaffold_2898

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2898_1
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..731
DNA (729bp) protein (243aa)
Multidrug efflux transporter protein n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HAG9_9RHIZ
Multidrug efflux transporter protein {ECO:0000313|EMBL:EPE95165.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
hydrophobe/amphiphile efflux-1 (HAE1) family transporter; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
SCNpilot_cont_500_bf_scaffold_2898_2
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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874..2334
DNA (1461bp) protein (487aa)
RND efflux system, outer membrane lipoprotein, NodT family n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM2304) RepID=B5ZNH6_RHILW rbh
NodT family RND efflux system outer membrane lipoprotein rbh
Efflux transporter, outer membrane factor lipoprotein, NodT family {ECO:0000313|EMBL:EJB05703.1}; Flags: Precursor;; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;"
SCNpilot_cont_500_bf_scaffold_2898_3
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2436..3065)
DNA (630bp) protein (210aa)
sn-glycerol-3-phosphate ABC transporter ATP-binding protein n=1 Tax=Rhizobium leguminosarum RepID=UPI000373BCF8
Glycerol-3-phosphate transporter subunit ATP-binding component of ABC superfamily {ECO:0000313|EMBL:CCM78576.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium mesoamericanum STM3625.;"
putative ATP-binding component of ABC transporter; K02023 multiple sugar transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_2898_4
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3498..4328)
DNA (831bp) protein (277aa)
ABC transporter permease n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI000367C36D
putative amino acid ABC transporter, permease protein
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:EJL53769.1}; Flags: Precursor;; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
SCNpilot_cont_500_bf_scaffold_2898_5
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4333..5268)
DNA (936bp) protein (312aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM2304) RepID=B6A3P1_RHILW
binding-protein-dependent transport systems inner membrane component; K02025 multiple sugar transport system permease protein
ABC transporter permease {ECO:0000313|EMBL:EJT06553.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
SCNpilot_cont_500_bf_scaffold_2898_6
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5353..6612)
DNA (1260bp) protein (420aa)
Sugar ABC transporter substrate-binding protein n=2 Tax=Rhizobium etli RepID=S5STA0_RHIET rbh
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:CDM61441.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
sugar ABC transporter, sugar-binding protein; K02027 multiple sugar transport system substrate-binding protein rbh
SCNpilot_cont_500_bf_scaffold_2898_7
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6650..7825)
DNA (1176bp) protein (392aa)
Cystathionine gamma-synthase protein n=1 Tax=Rhizobium etli (strain CIAT 652) RepID=B3Q1H7_RHIE6
mdeAa; hypothetical protein
Methionine gamma-lyase {ECO:0000313|EMBL:KEC70911.1}; TaxID=1408223 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. phaseoli CCGM1.;"
SCNpilot_cont_500_bf_scaffold_2898_8
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7822..8541)
DNA (720bp) protein (240aa)
GntR family transcriptional regulator n=1 Tax=Rhizobium leguminosarum RepID=UPI00037A6625 rbh
GntR family transcriptional regulator rbh
GntR domain protein {ECO:0000313|EMBL:ACI59027.1}; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM2304).;"
SCNpilot_cont_500_bf_scaffold_2898_9
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8942..10015
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4EZW7_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EHS53989.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_2898_10
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10175..13105
DNA (2931bp) protein (977aa)
Uncharacterized protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PXI5_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:KEC77186.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_2898_11
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13109..13912)
DNA (804bp) protein (268aa)
ABC transporter nucleotide binding/ATPase protein (Oligopeptide) n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K1I6_AGRVS
ABC transporter nucleotide binding/ATPase (oligopeptide); K02032 peptide/nickel transport system ATP-binding protein
ABC transporter nucleotide binding/ATPase protein (Oligopeptide) {ECO:0000313|EMBL:ACM38734.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
SCNpilot_cont_500_bf_scaffold_2898_12
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13909..14721)
DNA (813bp) protein (271aa)
ABC transporter nucleotide binding/ATPase protein (Oligopeptide) n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K1I5_AGRVS
ABC transporter nucleotide binding/ATPase (oligopeptide); K02031 peptide/nickel transport system ATP-binding protein
ABC transporter nucleotide binding/ATPase protein (Oligopeptide) {ECO:0000313|EMBL:ACM38733.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
SCNpilot_cont_500_bf_scaffold_2898_13
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14718..15149)
DNA (432bp) protein (144aa)
ABC transporter n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K1I4_AGRVS
ABC transporter; K02034 peptide/nickel transport system permease protein
ABC transporter {ECO:0000313|EMBL:ACM38732.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
Displaying 13 items

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