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SCNpilot_cont_500_bf_scaffold_2952

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2952_1
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..383)
DNA (381bp) protein (127aa)
aldehyde dehydrogenase; K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]
Aldehyde Dehydrogenase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GEZ8_ALIDK
Aldehyde dehydrogenase {ECO:0000313|EMBL:GAD20802.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
SCNpilot_cont_500_bf_scaffold_2952_2
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(410..1513)
DNA (1104bp) protein (368aa)
alcohol dehydrogenase zinc-binding domain-containing protein; K00121 S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
Zn-dependent alcohol dehydrogenase n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B72AA1 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB08035.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
SCNpilot_cont_500_bf_scaffold_2952_3
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1510..3069)
DNA (1560bp) protein (520aa)
AmP-dependent synthetase and ligase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AV08_AZOBR
AMP-dependent synthetase {ECO:0000313|EMBL:KJR63016.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
amP-dependent synthetase and ligase
SCNpilot_cont_500_bf_scaffold_2952_4
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3103..3876)
DNA (774bp) protein (258aa)
Enoyl-CoA hydratase/isomerase family protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A7X7_9PROT
Enoyl-CoA hydratase/isomerase family protein {ECO:0000313|EMBL:EHL96220.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
enoyl-CoA hydratase/isomerase
SCNpilot_cont_500_bf_scaffold_2952_5
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4035..4832)
DNA (798bp) protein (266aa)
Pca regulon regulatory protein n=2 Tax=Azospirillum brasilense Sp245 RepID=G8AV13_AZOBR
IclR family transcriptional regulator {ECO:0000313|EMBL:KJR63363.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
Pca regulon regulatory protein
SCNpilot_cont_500_bf_scaffold_2952_6
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4938..5624)
DNA (687bp) protein (229aa)
Transcriptional regulator, GntR family n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2ARH5_STRRD
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ACZ90315.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
SCNpilot_cont_500_bf_scaffold_2952_7
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5653..6402)
DNA (750bp) protein (250aa)
ABC transporter; K02028 polar amino acid transport system ATP-binding protein [EC:3.6.3.21]
ABC transporter related protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2ARH3_STRRD
ABC transporter related protein {ECO:0000313|EMBL:ACZ90313.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
SCNpilot_cont_500_bf_scaffold_2952_8
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6404..7513)
DNA (1110bp) protein (370aa)
ABC-type amino acid transport system permease component-like protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2ARH2_STRRD rbh
amino acid ABC transporter permease rbh
ABC-type amino acid transport system permease component-like protein {ECO:0000313|EMBL:ACZ90312.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
SCNpilot_cont_500_bf_scaffold_2952_9
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7510..8367)
DNA (858bp) protein (286aa)
Extracellular solute-binding protein, family 3 n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2ARH1_STRRD
extracellular solute-binding protein
Extracellular solute-binding protein, family 3 {ECO:0000313|EMBL:ACZ90311.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
SCNpilot_cont_500_bf_scaffold_2952_10
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8456..9196)
DNA (741bp) protein (247aa)
hypothetical protein; K01574 acetoacetate decarboxylase [EC:4.1.1.4]
Uncharacterized protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2ARH4_STRRD
Uncharacterized protein {ECO:0000313|EMBL:ACZ90314.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
SCNpilot_cont_500_bf_scaffold_2952_11
Streptomyces nodosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9492..10259
DNA (768bp) protein (256aa)
hypothetical protein; K01574 acetoacetate decarboxylase [EC:4.1.1.4]
Uncharacterized protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2ARH4_STRRD
Uncharacterized protein {ECO:0000313|EMBL:AJE39005.1}; TaxID=40318 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces nodosus.;"
SCNpilot_cont_500_bf_scaffold_2952_12
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10261..11097
DNA (837bp) protein (279aa)
pyrroline-5-carboxylate reductase (EC:1.5.1.2); K00286 pyrroline-5-carboxylate reductase [EC:1.5.1.2]
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
Pyrroline-5-carboxylate reductase n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UKQ4_SINMW
SCNpilot_cont_500_bf_scaffold_2952_13
Ochrobactrum sp. SJY1, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11146..11316)
DNA (171bp) protein (57aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0002EE01D5
Transcriptional regulator tetr family {ECO:0000313|EMBL:AIH15793.1}; TaxID=1526653 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. SJY1.;"
SCNpilot_cont_500_bf_scaffold_2952_14
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11578..11826
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0Q1C4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCM80158.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium mesoamericanum STM3625.;"
peptidoglycan-binding domain-containing protein
Displaying 14 items

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