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SCNpilot_cont_500_bf_scaffold_16647

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_16647_1
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..1248)
DNA (1248bp) protein (416aa)
L-sorbose 1-dehydrogenase (EC:1.1.99.32) rbh
UPI0003CFF664 related cluster n=1 Tax=unknown RepID=UPI0003CFF664 rbh
Alanine-phosphoribitol ligase {ECO:0000313|EMBL:ESZ10607.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
SCNpilot_cont_500_bf_scaffold_16647_2
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1248..2744)
DNA (1497bp) protein (499aa)
Betaine-aldehyde dehydrogenase (EC:1.2.1.8) rbh
UPI0003D00BB4 related cluster n=1 Tax=unknown RepID=UPI0003D00BB4 rbh
Sorbosone dehydrogenase {ECO:0000313|EMBL:ESZ10606.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
SCNpilot_cont_500_bf_scaffold_16647_3
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2766..3089)
DNA (324bp) protein (108aa)
L-threonine 3-dehydrogenase (EC:1.1.1.103)
UPI0003CFF17A related cluster n=1 Tax=unknown RepID=UPI0003CFF17A
Dehydrogenase {ECO:0000313|EMBL:KDP71860.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
SCNpilot_cont_500_bf_scaffold_16647_4
unknown

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3181..3780
DNA (600bp) protein (200aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_16647_5
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3675..6017)
DNA (2343bp) protein (781aa)
ABC-type sugar transport system, ATPase component (EC:3.6.3.17) rbh
UPI0003CFB5D1 related cluster n=1 Tax=unknown RepID=UPI0003CFB5D1 rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESZ10603.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
SCNpilot_cont_500_bf_scaffold_16647_6
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6026..6991)
DNA (966bp) protein (322aa)
UPI0003CFACD7 related cluster n=1 Tax=unknown RepID=UPI0003CFACD7 rbh
ABC transporter permease {ECO:0000313|EMBL:ESZ10602.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
ABC transporter permease rbh
SCNpilot_cont_500_bf_scaffold_16647_7
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7137..8264)
DNA (1128bp) protein (376aa)
UPI0003CFE126 related cluster n=1 Tax=unknown RepID=UPI0003CFE126 rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ESZ10601.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
ABC transporter substrate-binding protein; K10439 ribose transport system substrate-binding protein rbh
SCNpilot_cont_500_bf_scaffold_16647_8
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8442..9095
DNA (654bp) protein (218aa)
UPI0003D038C3 related cluster n=1 Tax=unknown RepID=UPI0003D038C3 rbh
TetR family transcriptional regulator {ECO:0000313|EMBL:ESZ10600.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
TetR family transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_16647_9
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9008..10060)
DNA (1053bp) protein (351aa)
polyamine ABC transporter permease n=1 Tax=Rhizobium meliloti RepID=UPI00037EFC02
binding-protein-dependent transport system inner membrane protein; K02053 putative spermidine/putrescine transport system permease protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABR60553.1}; Flags: Precursor;; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
SCNpilot_cont_500_bf_scaffold_16647_10
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10057..10662)
DNA (606bp) protein (202aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UA72_SINMW
binding-protein-dependent transport system inner membrane protein; K02054 putative spermidine/putrescine transport system permease protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABR60552.1}; Flags: Precursor;; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
Displaying 10 items

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