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SCNpilot_cont_500_bf_scaffold_9488

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_9488_1
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..808
DNA (807bp) protein (269aa)
sugar ABC transporter ATP-binding protein n=1 Tax=Paracoccus sp. N5 RepID=UPI00035C3E74 rbh
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGJ11415.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
ABC transporter; K10554 fructose transport system ATP-binding protein rbh
SCNpilot_cont_500_bf_scaffold_9488_2
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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808..1431
DNA (624bp) protein (208aa)
frcK; Pantothenate kinase (EC:2.7.1.33)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI00038123EF rbh
Nucleoside triphosphate hydrolase domain-containing protein {ECO:0000313|EMBL:EMS95381.1}; TaxID=1281779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens str. Cherry 2E-2-2.;"
SCNpilot_cont_500_bf_scaffold_9488_3
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1539..2591
DNA (1053bp) protein (351aa)
pyrC; dihydroorotase; K01465 dihydroorotase [EC:3.5.2.3]
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00219, ECO:0000256|RuleBase:RU003440}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00219};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00219, ECO:0000256|RuleBase:RU003440};; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
Dihydroorotase n=2 Tax=Rhizobium/Agrobacterium group RepID=PYRC_AGRRK
SCNpilot_cont_500_bf_scaffold_9488_4
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2630..3319
DNA (690bp) protein (230aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
pyrE; orotate phosphoribosyltransferase; K00762 orotate phosphoribosyltransferase [EC:2.4.2.10]
Orotate phosphoribosyltransferase n=1 Tax=Rhizobium sp. RepID=L0NBU6_RHISP rbh
SCNpilot_cont_500_bf_scaffold_9488_5
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3397..4323
DNA (927bp) protein (309aa)
scrK; fructokinase; K00847 fructokinase [EC:2.7.1.4] rbh
Fructokinase n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JQW2_AGRVS rbh
Fructokinase {ECO:0000313|EMBL:ACM35375.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
SCNpilot_cont_500_bf_scaffold_9488_6
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4423..4614)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0VHA5_RHILT
Uncharacterized protein {ECO:0000313|EMBL:EJC72706.1}; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;"
hypothetical protein
Displaying 6 items

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