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This organism can only be binned in the context of its binning project SR-VP_26_10_2019_1_100cm. Please contact the project owner (crits-christoph@berkeley.edu) to become a member and gain access.

SCNpilot_cont_500_bf_scaffold_9984

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_9984_1
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..1093)
DNA (1092bp) protein (364aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;"
xseA; exodeoxyribonuclease VII large subunit; K03601 exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
Exodeoxyribonuclease 7 large subunit n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0VPB6_RHILT
SCNpilot_cont_500_bf_scaffold_9984_2
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1263..1526
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. RepID=L0NMD7_RHISP
Uncharacterized protein {ECO:0000313|EMBL:CCF21971.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_9984_3
unknown

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1631..1876
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_9984_4
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1883..2974)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF142 RepID=J1T0D4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJJ30998.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_9984_5
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3155..3751
DNA (597bp) protein (199aa)
Uncharacterized protein {ECO:0000313|EMBL:CDX42601.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
SCNpilot_cont_500_bf_scaffold_9984_6
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3825..4814
DNA (990bp) protein (330aa)
glycosyltransferase (EC:2.4.1.83) rbh
Probable glycosyltransferase protein n=1 Tax=Rhizobium etli (strain CIAT 652) RepID=B3PYF3_RHIE6 rbh
Glycosyltransferase family 2 protein {ECO:0000313|EMBL:AIC25464.1}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. IE4771.;"
SCNpilot_cont_500_bf_scaffold_9984_7
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4828..5523
DNA (696bp) protein (232aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Rhizobium sp. CF080 RepID=J2KEV0_9RHIZ rbh
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:CDN56717.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
type 11 SAM-dependent methyltransferase
SCNpilot_cont_500_bf_scaffold_9984_8
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5528..5890
DNA (363bp) protein (121aa)
EamA-like transporter family n=1 Tax=Rhizobium sp. CF080 RepID=J3CUF9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EUC00567.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_9984_9
unknown

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5890..6219
DNA (330bp) protein (110aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_9984_10
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6216..7202)
DNA (987bp) protein (329aa)
Oxidoreductase protein {ECO:0000313|EMBL:CDM56006.1}; EC=1.1.1.18 {ECO:0000313|EMBL:CDM56006.1};; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
Putative oxidoreductase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LEE4_RHITR
putative oxidoreductase
SCNpilot_cont_500_bf_scaffold_9984_11
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7384..7575
DNA (192bp) protein (64aa)
NADP-dependent aryl-alcohol dehydrogenase n=1 Tax=Sinorhizobium medicae RepID=UPI000380ECF8
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:ABR62312.1}; Flags: Precursor;; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
Displaying 11 items

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