ggKbase home page

SCNpilot_cont_500_bf_scaffold_13975

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_13975_1
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3..263
DNA (261bp) protein (87aa)
50S ribosomal protein L6 n=2 Tax=Agrobacterium RepID=RL6_AGRT5
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
SCNpilot_cont_500_bf_scaffold_13975_2
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


276..638
DNA (363bp) protein (121aa)
50S ribosomal protein L18 n=2 Tax=Rhizobium/Agrobacterium group RepID=RL18_AGRRK
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
rplR; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18
SCNpilot_cont_500_bf_scaffold_13975_3
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


782..1351
DNA (570bp) protein (190aa)
30S ribosomal protein S5 n=5 Tax=Agrobacterium RepID=RS5_AGRT5 rbh
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 rbh
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1082932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens CCNWGS0286.;"
SCNpilot_cont_500_bf_scaffold_13975_4
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1364..1552
DNA (189bp) protein (63aa)
50S ribosomal protein L30 n=1 Tax=Rhizobium radiobacter RepID=UPI00035EEE30
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
rpmD; 50S ribosomal protein L30; K02907 large subunit ribosomal protein L30
SCNpilot_cont_500_bf_scaffold_13975_5
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1569..2039
DNA (471bp) protein (157aa)
50S ribosomal protein L15 n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X7W3_RHIFR
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
rplO; 50S ribosomal protein L15
SCNpilot_cont_500_bf_scaffold_13975_6
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2277..3485
DNA (1209bp) protein (403aa)
Protein translocase subunit SecY n=2 Tax=Rhizobium etli RepID=Q2K9J6_RHIEC
secY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;"
Displaying 6 items

View Taxonomy