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SCNpilot_cont_500_bf_scaffold_1761

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1761_1
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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100..1176
DNA (1077bp) protein (359aa)
Putative polyamine ABC transporter, substrate-binding protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LW99_RHITR rbh
putative polyamine ABC transporter, substrate-binding protein rbh
Putative polyamine ABC transporter, substrate-binding protein {ECO:0000313|EMBL:AGB75512.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_1761_2
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1166..2038
DNA (873bp) protein (291aa)
Putative polyamine ABC transporter, permease protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LW61_RHITR rbh
putative polyamine ABC transporter, permease protein rbh
Putative polyamine ABC transporter, permease protein {ECO:0000313|EMBL:AGB75513.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_1761_3
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2035..2721
DNA (687bp) protein (229aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Sinorhizobium meliloti CCNWSX0020 RepID=H0FVX8_RHIML
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EHK78840.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
putative polyamine ABC transporter, permease protein
SCNpilot_cont_500_bf_scaffold_1761_4
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2708..3775
DNA (1068bp) protein (356aa)
spermidine/putrescine ABC transporter ATPase n=1 Tax=Rhizobium leguminosarum RepID=UPI00037A2C97 rbh
Spermidine/putrescine ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEA07718.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
putative polyamine ABC transporter, ATP-binding protein rbh
SCNpilot_cont_500_bf_scaffold_1761_5
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3772..4350
DNA (579bp) protein (193aa)
Nicotinamidase-like amidase n=1 Tax=Rhizobium sp. CF122 RepID=J2RCY7_9RHIZ
Nicotinamidase-like amidase {ECO:0000313|EMBL:EJL50552.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
isochorismatase hydrolase
SCNpilot_cont_500_bf_scaffold_1761_6
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5185..5691
DNA (507bp) protein (169aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y8I1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX17822.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1761_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5771..6268
DNA (498bp) protein (166aa)
Free methionine-R-sulfoxide reductase MsrC {ECO:0000313|EMBL:EYR84423.1}; EC=1.8.4.14 {ECO:0000313|EMBL:EYR84423.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Free methionine-R-sulfoxide reductase MsrC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CWM8_9RHIZ
putative GAF sensor protein; K07170 GAF domain-containing protein
SCNpilot_cont_500_bf_scaffold_1761_8
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6289..6768)
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI00037AD51A
Uncharacterized protein {ECO:0000313|EMBL:EUC00463.1}; Flags: Precursor;; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1761_9
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7054..7794)
DNA (741bp) protein (247aa)
Phosphonates metabolism transcriptional regulator PhnF n=1 Tax=Microvirga sp. WSM3557 RepID=I4YST6_9RHIZ rbh
Phosphonates metabolism transcriptional regulator PhnF {ECO:0000313|EMBL:EIM27028.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
phosphonates metabolism transcriptional regulator PhnF; K02043 GntR family transcriptional regulator, phosphonate transport system regulatory protein
SCNpilot_cont_500_bf_scaffold_1761_10
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7897..8349
DNA (453bp) protein (151aa)
Phosphonate C-P lyase system protein PhnG n=1 Tax=Microvirga sp. WSM3557 RepID=I4YST7_9RHIZ
Phosphonate C-P lyase system protein PhnG {ECO:0000313|EMBL:EIM27029.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
phnG; phosphonate metabolism protein; K06166 PhnG protein
SCNpilot_cont_500_bf_scaffold_1761_11
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8349..8954
DNA (606bp) protein (202aa)
Phosphonate C-P lyase system protein PhnH n=1 Tax=Microvirga sp. WSM3557 RepID=I4YST8_9RHIZ
Phosphonate C-P lyase system protein PhnH {ECO:0000313|EMBL:EIM27030.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
phnH; carbon-phosphorus lyase complex subunit; K06165 PhnH protein
SCNpilot_cont_500_bf_scaffold_1761_12
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8958..10058
DNA (1101bp) protein (367aa)
Putative enzyme of phosphonate metabolism n=1 Tax=Microvirga sp. WSM3557 RepID=I4YST9_9RHIZ rbh
Putative enzyme of phosphonate metabolism {ECO:0000313|EMBL:EIM27031.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
phnI; phosphonate metabolism protein PhnI
SCNpilot_cont_500_bf_scaffold_1761_13
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10055..10954
DNA (900bp) protein (300aa)
Putative enzyme of phosphonate metabolism n=1 Tax=Microvirga sp. WSM3557 RepID=I4YSU0_9RHIZ rbh
Putative enzyme of phosphonate metabolism {ECO:0000313|EMBL:EIM27032.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
phnJ; Protein phnJ; K06163 PhnJ protein
SCNpilot_cont_500_bf_scaffold_1761_14
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10951..11727
DNA (777bp) protein (259aa)
Phosphonate C-P lyase system protein PhnK n=1 Tax=Microvirga sp. WSM3557 RepID=I4YSU1_9RHIZ rbh
Carbon-phosphorus lyase complex subunit PhnK {ECO:0000313|EMBL:GAK69642.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
phnK; phosphonate C-P lyase system protein PhnK; K05781 putative phosphonate transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_1761_15
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11730..12458
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI0003757900 rbh
Phosphonate C-P lyase system protein PhnL {ECO:0000313|EMBL:EIM27034.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
phosphonate ABC transporter ATP-binding protein; K05780 putative phosphonate transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_1761_16
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12458..13123
DNA (666bp) protein (222aa)
Phosphonate metabolim protein, transferase hexapeptide repeat family n=1 Tax=Microvirga sp. WSM3557 RepID=I4YSU3_9RHIZ rbh
Phosphonate metabolim protein, transferase hexapeptide repeat family {ECO:0000313|EMBL:EIM27035.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
putative acetyltransferase protein rbh
SCNpilot_cont_500_bf_scaffold_1761_17
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13154..13993
DNA (840bp) protein (280aa)
Phosphonates import ATP-binding protein PhnC {ECO:0000256|HAMAP-Rule:MF_01713}; EC=3.6.3.28 {ECO:0000256|HAMAP-Rule:MF_01713};; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
phosphonate ABC transporter ATPase; K02041 phosphonate transport system ATP-binding protein [EC:3.6.3.28]
Phosphonate ABC transporter, ATP-binding protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YSU4_9RHIZ rbh
SCNpilot_cont_500_bf_scaffold_1761_18
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14019..15005
DNA (987bp) protein (329aa)
Phosphonate ABC transporter, periplasmic phosphonate binding protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YSU5_9RHIZ rbh
Phosphonate ABC transporter, periplasmic phosphonate binding protein {ECO:0000313|EMBL:EIM27037.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
phosphonate ABC transporter periplasmic phosphonate binding protein; K02044 phosphonate transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_1761_19
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15179..16012
DNA (834bp) protein (278aa)
Phosphonate ABC transporter, permease protein PhnE n=1 Tax=Microvirga sp. WSM3557 RepID=I4YSU6_9RHIZ rbh
Phosphonate ABC transporter, permease protein PhnE {ECO:0000313|EMBL:EIM27038.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
phosphonate ABC transporter permease; K02042 phosphonate transport system permease protein
SCNpilot_cont_500_bf_scaffold_1761_20
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16034..17173
DNA (1140bp) protein (380aa)
Phosphonate metabolism protein PhnM n=1 Tax=Microvirga sp. WSM3557 RepID=I4YSU8_9RHIZ rbh
Phosphonate metabolism protein PhnM {ECO:0000313|EMBL:EIM27040.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
phosphonate metabolism protein; K06162 PhnM protein
SCNpilot_cont_500_bf_scaffold_1761_21
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17163..17762
DNA (600bp) protein (200aa)
phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN; K05774 ribose 1,5-bisphosphokinase [EC:2.7.4.23]
Phosphonate metabolism protein, PRPP-forming 1,5-bisphosphokinase PhnN n=1 Tax=Microvirga sp. WSM3557 RepID=I4YSU9_9RHIZ
Phosphonate metabolism protein, PRPP-forming 1,5-bisphosphokinase PhnN {ECO:0000313|EMBL:EIM27041.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
SCNpilot_cont_500_bf_scaffold_1761_22
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(17766..19220)
DNA (1455bp) protein (485aa)
metal-binding protein n=1 Tax=Rhizobium mongolense RepID=UPI0003B3646F rbh
CYTH-like CHAD domain-containing protein {ECO:0000313|EMBL:AJD42466.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
CHAD domain-containing protein rbh
SCNpilot_cont_500_bf_scaffold_1761_23
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19319..20503)
DNA (1185bp) protein (395aa)
Amidase; K01426 amidase [EC:3.5.1.4]
Glu-tRNA amidotransferase, subunit A n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ENI5_9RHIZ rbh
Glu-tRNA amidotransferase, subunit A {ECO:0000313|EMBL:EYR82216.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Displaying 23 items

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