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SCNpilot_cont_500_bf_scaffold_10224

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_10224_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..535
DNA (534bp) protein (178aa)
capsid protein n=1 Tax=Rhizobium giardinii RepID=UPI0003604AC0
Phage major capsid protein, HK97 family {ECO:0000313|EMBL:EYR83854.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
phage major capsid protein HK97 family
SCNpilot_cont_500_bf_scaffold_10224_2
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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611..1174
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF080 RepID=J3CKA5_9RHIZ
Bacteriophage QLRG family DNA packaging {ECO:0000313|EMBL:EUB95255.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_10224_3
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1177..1512
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000374735E
Phage head-tail adaptor {ECO:0000313|EMBL:EPE99018.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
phage head-tail adaptor
SCNpilot_cont_500_bf_scaffold_10224_4
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1509..1907
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7U7N9_RHIRD
Gene transfer agent (GTA) like protein {ECO:0000313|EMBL:CDN53217.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_10224_5
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1929..3146)
DNA (1218bp) protein (406aa)
Putative transporter, permease protein n=1 Tax=Rhizobium etli (strain CFN 42 / ATCC 51251) RepID=Q2KAP7_RHIEC rbh
transporter, permease rbh
Putative transporter, permease protein {ECO:0000313|EMBL:ABC90089.1}; TaxID=347834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CFN 42 / ATCC 51251).;"
SCNpilot_cont_500_bf_scaffold_10224_6
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3256..3663
DNA (408bp) protein (136aa)
Phage major tail protein, TP901-1 family n=1 Tax=Rhizobium sp. CF080 RepID=J2RSR3_9RHIZ
Phage major tail protein, TP901-1 family {ECO:0000313|EMBL:EUB95249.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
Phage major tail protein
SCNpilot_cont_500_bf_scaffold_10224_7
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3663..4031
DNA (369bp) protein (123aa)
Putative uncharacterized protein n=1 Tax=Agrobacterium sp. ATCC 31749 RepID=F5J7Z8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDN91433.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_10224_8
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4082..4252
DNA (171bp) protein (57aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI000376D22B
Uncharacterized protein {ECO:0000313|EMBL:EPE99024.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
SCNpilot_cont_500_bf_scaffold_10224_9
unknown

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4255..4377
DNA (123bp) protein (41aa)

This feature has no annotations

Displaying 9 items

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