ggKbase home page

SCNpilot_cont_500_bf_scaffold_8092

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_8092_1
unknown

Not on your lists

comp(2..67)
DNA (66bp) protein (22aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_8092_2
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(183..896)
DNA (714bp) protein (238aa)
Malto-oligosyltrehalose synthase (TreY) {ECO:0000313|EMBL:CCF20320.1}; EC=5.4.99.15 {ECO:0000313|EMBL:CCF20320.1};; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
Malto-oligosyltrehalose synthase (TreY) n=1 Tax=Rhizobium sp. RepID=L0NGX5_RHISP
hypothetical protein
SCNpilot_cont_500_bf_scaffold_8092_3
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1115..2764)
DNA (1650bp) protein (550aa)
malto-oligosyltrehalose synthase (EC:5.4.99.15); K06044 (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15]
Malto-oligosyltrehalose synthase n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=J0GVH7_RHILT
Malto-oligosyltrehalose synthase {ECO:0000313|EMBL:KEC71120.1}; TaxID=1408223 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. phaseoli CCGM1.;"
SCNpilot_cont_500_bf_scaffold_8092_4
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2837..3157)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF080 RepID=J2I7X1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDN56904.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
SCNpilot_cont_500_bf_scaffold_8092_5
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3190..3975)
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00036C4119
Endonuclease {ECO:0000313|EMBL:KGF67702.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
hypothetical protein; K06896
SCNpilot_cont_500_bf_scaffold_8092_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4039..4998
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CWU3_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR77996.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein; K07027 rbh
SCNpilot_cont_500_bf_scaffold_8092_7
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4929..6440)
DNA (1512bp) protein (504aa)
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase n=1 Tax=Rhizobium sp. CF080 RepID=J2I549_9RHIZ rbh
Phospholipase D {ECO:0000313|EMBL:KGD96284.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
phospholipase D/transphosphatidylase rbh
SCNpilot_cont_500_bf_scaffold_8092_8
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6567..7622
DNA (1056bp) protein (352aa)
putative DNA topoisomerase I protein; K03168 DNA topoisomerase I [EC:5.99.1.2] rbh
Topoisomerase IB n=1 Tax=Rhizobium sp. CF080 RepID=J3CWB4_9RHIZ rbh
Topoisomerase IB {ECO:0000313|EMBL:CDN49489.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
SCNpilot_cont_500_bf_scaffold_8092_9
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7657..7905)
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00037B2F4D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EYR84665.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
SCNpilot_cont_500_bf_scaffold_8092_10
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7902..8306)
DNA (405bp) protein (135aa)
Putative signal transduction protein with CBS domains n=1 Tax=Sinorhizobium meliloti CCNWSX0020 RepID=H0FUN1_RHIML
signal transduction protein
Putative signal transduction protein with CBS domains {ECO:0000313|EMBL:EHK79216.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
SCNpilot_cont_500_bf_scaffold_8092_11
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8791..10773
DNA (1983bp) protein (661aa)
Blue-light-activated protein {ECO:0000313|EMBL:EYR84668.1}; EC=2.7.13.3 {ECO:0000313|EMBL:EYR84668.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Blue-light-activated protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CAP8_9RHIZ
putative signaling protein
Displaying 11 items

View Taxonomy