ggKbase home page

SCNpilot_cont_500_bf_scaffold_8201

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_8201_1
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..376)
DNA (375bp) protein (125aa)
gldA; glycerol dehydrogenase; K00005 glycerol dehydrogenase [EC:1.1.1.6]
Glycerol dehydrogenase protein id=2898391 bin=GWF1_Rhodobacteraceae_65_7 species=Agrobacterium vitis genus=Agrobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
Tax=GWF1_Rhodobacteraceae_65_7_curated
SCNpilot_cont_500_bf_scaffold_8201_2
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(553..1341)
DNA (789bp) protein (263aa)
Short-chain dehydrogenase/reductase id=2898441 bin=GWF1_Rhodobacteraceae_65_7 species=Agrobacterium vitis genus=Agrobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
short-chain dehydrogenase/reductase
Tax=GWF1_Rhodobacteraceae_65_7_curated
SCNpilot_cont_500_bf_scaffold_8201_3
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1370..2206)
DNA (837bp) protein (279aa)
Dehydrogenase id=2898444 bin=GWF1_Rhodobacteraceae_65_7 species=Agrobacterium vitis genus=Agrobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
dehydrogenase
Tax=GWF1_Rhodobacteraceae_65_7_curated
SCNpilot_cont_500_bf_scaffold_8201_4
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2200..2841)
DNA (642bp) protein (214aa)
Dehydrogenase id=2898444 bin=GWF1_Rhodobacteraceae_65_7 species=Agrobacterium vitis genus=Agrobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
dehydrogenase
Tax=GWF1_Rhodobacteraceae_65_7_curated
SCNpilot_cont_500_bf_scaffold_8201_5
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2925..4466)
DNA (1542bp) protein (514aa)
garD; D-galactarate dehydratase; K01708 galactarate dehydratase [EC:4.2.1.42] rbh
D-galactarate dehydratase id=2898446 bin=GWF1_Rhodobacteraceae_65_7 species=Agrobacterium vitis genus=Agrobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
Tax=GWF1_Rhodobacteraceae_65_7_curated
SCNpilot_cont_500_bf_scaffold_8201_6
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4466..5143)
DNA (678bp) protein (226aa)
Transcriptional regulator GntR family id=2898448 bin=GWF1_Rhodobacteraceae_65_7 species=Agrobacterium vitis genus=Agrobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
GntR family transcriptional regulator
Tax=GWF1_Rhodobacteraceae_65_7_curated
SCNpilot_cont_500_bf_scaffold_8201_7
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5346..6458
DNA (1113bp) protein (371aa)
Dehydrogenase id=2898450 bin=GWF1_Rhodobacteraceae_65_7 species=Agrobacterium vitis genus=Agrobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
dehydrogenase rbh
Tax=GWF1_Rhodobacteraceae_65_7_curated
SCNpilot_cont_500_bf_scaffold_8201_8
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6551..7285
DNA (735bp) protein (245aa)
Carbohydrate binding protein id=2898452 bin=GWF1_Rhodobacteraceae_65_7 species=Agrobacterium vitis genus=Agrobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
carbohydrate binding protein; K10439 ribose transport system substrate-binding protein rbh
Tax=GWF1_Rhodobacteraceae_65_7_curated
Displaying 8 items

View Taxonomy