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SCNpilot_cont_500_bf_scaffold_8327

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_8327_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1260
DNA (1260bp) protein (420aa)
dld; D-lactate dehydrogenase (cytochrome) protein (EC:1.1.2.4); K00102 D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4]
Glycolate oxidase subunit GlcD n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CXS7_9RHIZ
Glycolate oxidase subunit GlcD {ECO:0000313|EMBL:EYR81739.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
SCNpilot_cont_500_bf_scaffold_8327_2
unknown

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comp(1520..1888)
DNA (369bp) protein (123aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_8327_3
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2619..4310
DNA (1692bp) protein (564aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. AP16 RepID=J2CYB0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJK82219.1}; Flags: Precursor;; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_8327_4
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4328..5071
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U515_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN87704.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_8327_5
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5065..5340)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF142 RepID=J1SZB8_9RHIZ
Arylsulfate sulfotransferase {ECO:0000313|EMBL:KDP75102.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
arylsulfate sulfotransferase
SCNpilot_cont_500_bf_scaffold_8327_6
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5345..5542)
DNA (198bp) protein (66aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI00035C570C
hypothetical protein
Strain MEJ076 contig_3, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ05193.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
SCNpilot_cont_500_bf_scaffold_8327_7
Rhizobium sp. IRBG74, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5561..6061)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Rhizobium lupini HPC(L) RepID=K5C4Z5_RHILU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDI09017.1}; TaxID=424182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. IRBG74.;"
SCNpilot_cont_500_bf_scaffold_8327_8
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6655..6966
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7U8B1_RHIRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ98505.1}; TaxID=1107544 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens 5A.;"
SCNpilot_cont_500_bf_scaffold_8327_9
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7088..7882
DNA (795bp) protein (265aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215290};; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; rad
thyA; thymidylate synthase (EC:2.1.1.45); K00560 thymidylate synthase [EC:2.1.1.45] rbh
thymidylate synthase n=1 Tax=Rhizobium radiobacter RepID=UPI00035C84E3 rbh
SCNpilot_cont_500_bf_scaffold_8327_10
Ochrobactrum sp. EGD-AQ16, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7879..8409
DNA (531bp) protein (177aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. EGD-AQ16.;"
folA; protein FolA; K00287 dihydrofolate reductase [EC:1.5.1.3]
Dihydrofolate reductase n=2 Tax=Ochrobactrum intermedium RepID=C4WF14_9RHIZ
SCNpilot_cont_500_bf_scaffold_8327_11
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8543..9181
DNA (639bp) protein (213aa)
Hydrolase serine protease transmembrane subunit K protein n=2 Tax=Rhizobium etli RepID=Q2K6H0_RHIEC
hflK; protein HflK
Hydrolase serine protease transmembrane subunit K protein {ECO:0000313|EMBL:ABC91566.1}; TaxID=347834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CFN 42 / ATCC 51251).;"
Displaying 11 items

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