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SCNpilot_cont_500_bf_scaffold_8583

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_8583_1
unknown

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comp(2..94)
DNA (93bp) protein (31aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_8583_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(118..435)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CXF0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR78017.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_8583_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(749..1708)
DNA (960bp) protein (320aa)
ABC transporter, substrate binding protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D531_9RHIZ rbh
ABC transporter, substrate binding protein {ECO:0000313|EMBL:EYR83803.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Putative ABC transporter (substrate-binding protein) rbh
SCNpilot_cont_500_bf_scaffold_8583_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1727..2593)
DNA (867bp) protein (289aa)
Manganese transport system membrane protein MntC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CW55_9RHIZ rbh
Manganese transport system membrane protein MntC {ECO:0000313|EMBL:EYR83804.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
iron ABC transporter membrane spanning protein
SCNpilot_cont_500_bf_scaffold_8583_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2586..3362)
DNA (777bp) protein (259aa)
Manganese transport system ATP-binding protein MntB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CG41_9RHIZ rbh
Manganese transport system ATP-binding protein MntB {ECO:0000313|EMBL:EYR83805.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
metal transport system ATP-binding protein rbh
SCNpilot_cont_500_bf_scaffold_8583_6
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3596..4009
DNA (414bp) protein (138aa)
Putative zinc uptake regulation protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CW60_9RHIZ
Fur family transcriptional regulator {ECO:0000313|EMBL:KGD99605.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
zur; zinc uptake regulation protein; K09823 Fur family transcriptional regulator, zinc uptake regulator
SCNpilot_cont_500_bf_scaffold_8583_7
Rhizobium sp. UR51a, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4081..4557
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Agrobacterium sp. 224MFTsu3.1 RepID=UPI00036554B0
Putative metal chaperone {ECO:0000313|EMBL:KIV66829.1}; TaxID=1604021 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. UR51a.;"
putative cobalamin biosynthesis protein
SCNpilot_cont_500_bf_scaffold_8583_8
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4523..5188
DNA (666bp) protein (222aa)
Putative GTPase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CG46_9RHIZ
Putative GTPase {ECO:0000313|EMBL:EYR83810.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
yciC1; metal chaperone YciC
SCNpilot_cont_500_bf_scaffold_8583_9
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5586..5942
DNA (357bp) protein (119aa)
Mlr8225 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q983Q4_RHILO
Putative metal-binding protein {ECO:0000313|EMBL:ETA72447.1}; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_8583_10
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5939..6736
DNA (798bp) protein (266aa)
iron ABC transporter ATP-binding protein; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34]
ABC transporter related protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F973_9RHIZ
ABC transporter related protein {ECO:0000313|EMBL:CCV13035.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
SCNpilot_cont_500_bf_scaffold_8583_11
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6733..7680
DNA (948bp) protein (316aa)
Iron (III) ABC transporter, periplasmic-binding protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q983Q2_RHILO rbh
iron (III) ABC transporter substrate-binding protein; K02016 iron complex transport system substrate-binding protein rbh
Iron (III) ABC transporter, periplasmic-binding protein {ECO:0000313|EMBL:BAB53828.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_500_bf_scaffold_8583_12
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7683..8690
DNA (1008bp) protein (336aa)
Transport system permease protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TJF8_MESCW rbh
transport system permease; K02015 iron complex transport system permease protein rbh
Transport system permease protein {ECO:0000313|EMBL:ADV13720.1}; Flags: Precursor;; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_cont_500_bf_scaffold_8583_13
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9227..9361)
DNA (135bp) protein (45aa)
ABC transporter permease n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00035D2AE3
ABC transporter permease {ECO:0000313|EMBL:KGD87512.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
binding-protein-dependent transport system inner membrane protein; K02011 iron(III) transport system permease protein
Displaying 13 items

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