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SCNpilot_cont_500_bf_scaffold_8702

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_8702_1
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..605)
DNA (603bp) protein (201aa)
hemolysin secretion protein D n=1 Tax=Rhizobium phaseoli RepID=UPI0003080ABC
protein secretion protein, HylD family; K02005 HlyD family secretion protein
Uncharacterized protein {ECO:0000313|EMBL:EGE59114.1}; TaxID=993047 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli CNPAF512.;"
SCNpilot_cont_500_bf_scaffold_8702_2
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(952..1785)
DNA (834bp) protein (278aa)
Metal-dependent hydrolase, beta-lactamase superfamily I n=1 Tax=Rhizobium sp. CF080 RepID=J3CJ50_9RHIZ rbh
Beta-lactamase domain protein {ECO:0000313|EMBL:EUB95557.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
beta-lactamase; K06167 PhnP protein
SCNpilot_cont_500_bf_scaffold_8702_3
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1790..2569)
DNA (780bp) protein (260aa)
TatD family hydrolase; K03424 TatD DNase family protein [EC:3.1.21.-]
LuxR family transcriptional regulator n=1 Tax=Rhizobium leguminosarum RepID=UPI00038080AD
Deoxyribonuclease TatD-related protein {ECO:0000313|EMBL:AJD41259.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
SCNpilot_cont_500_bf_scaffold_8702_4
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2584..4140)
DNA (1557bp) protein (519aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00012840}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00012840};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
metS; methionyl-tRNA synthetase (EC:6.1.1.10); K01874 methionyl-tRNA synthetase [EC:6.1.1.10]
methionyl-tRNA synthetase n=1 Tax=Rhizobium mongolense RepID=UPI0003B43DE3 rbh
SCNpilot_cont_500_bf_scaffold_8702_5
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4228..4929)
DNA (702bp) protein (234aa)
DNA polymerase III subunit delta'; K02341 DNA polymerase III subunit delta' [EC:2.7.7.7]
DNA polymerase III, delta prime subunit {ECO:0000313|EMBL:CDH85541.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CDH85541.1};; TaxID=1401243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti RU11/001.;"
DNA polymerase III subunit delta n=6 Tax=Rhizobium meliloti RepID=F6BPA3_SINMB
SCNpilot_cont_500_bf_scaffold_8702_6
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4919..5167)
DNA (249bp) protein (83aa)
holB; DNA polymerase III subunit delta'; K02341 DNA polymerase III subunit delta' [EC:2.7.7.7]
DNA polymerase III subunit delta {ECO:0000313|EMBL:AHF84061.1}; EC=2.7.7.7 {ECO:0000313|EMBL:AHF84061.1};; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM1689.;"
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. viciae WSM1455 RepID=J0V0F0_RHILV
SCNpilot_cont_500_bf_scaffold_8702_7
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5164..5826)
DNA (663bp) protein (221aa)
tmk; thymidylate kinase (EC:2.7.4.9); K00943 dTMP kinase [EC:2.7.4.9]
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=347834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CFN 42 / ATCC 51251).;"
thymidylate kinase n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI0003823A6D
SCNpilot_cont_500_bf_scaffold_8702_8
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5970..6371)
DNA (402bp) protein (134aa)
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:EUB95562.1}; EC=3.4.16.4 {ECO:0000313|EMBL:EUB95562.1};; Flags: Precursor;; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
dacD; D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Rhizobium sp. CF080 RepID=J2IW68_9RHIZ
Displaying 8 items

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