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SCNpilot_cont_500_bf_scaffold_3128

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3128_trna_1
unknown

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comp(1..71)
DNA (71bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_3128_1
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(207..590)
DNA (384bp) protein (128aa)
Response regulator receiver protein n=2 Tax=Rhizobium/Agrobacterium group RepID=H4FC94_9RHIZ
Chemotaxis response regulator {ECO:0000313|EMBL:EKF58807.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
two-component response regulator protein; K13589 two-component system, cell cycle response regulator CpdR
SCNpilot_cont_500_bf_scaffold_3128_2
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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772..1656
DNA (885bp) protein (295aa)
N-formylglutamate amidohydrolase n=1 Tax=Rhizobium sp. CF142 RepID=J1T4R5_9RHIZ
N-formylglutamate amidohydrolase {ECO:0000313|EMBL:EJJ26641.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
N-formylglutamate amidohydrolase
SCNpilot_cont_500_bf_scaffold_3128_3
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1899..2672
DNA (774bp) protein (258aa)
Putative Inositol monophosphatase family protein {ECO:0000313|EMBL:CCF20466.1}; EC=3.1.3.25 {ECO:0000313|EMBL:CCF20466.1};; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
Putative Inositol monophosphatase family protein n=1 Tax=Rhizobium sp. RepID=L0NI22_RHISP rbh
inositol monophosphatase family protein
SCNpilot_cont_500_bf_scaffold_3128_4
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2779..3750)
DNA (972bp) protein (324aa)
lysophospholipase (EC:3.1.1.5); K01048 lysophospholipase [EC:3.1.1.5]
lysophospholipase n=1 Tax=Rhizobium mongolense RepID=UPI0003B601DE
Lysophospholipase protein {ECO:0000313|EMBL:AJD42779.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
SCNpilot_cont_500_bf_scaffold_3128_5
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4140..4628
DNA (489bp) protein (163aa)
HSP20 family small heat shock protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LNW8_RHITR
HSP20 family small heat shock protein
HSP20 family small heat shock protein {ECO:0000313|EMBL:AGB72411.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_3128_6
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4692..5678)
DNA (987bp) protein (329aa)
membrane protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00037B1A63 rbh
Membrane protein {ECO:0000313|EMBL:AHF85633.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM1689.;"
transmembrane protein; K14347 solute carrier family 10 (sodium/bile acid cotransporter), member 7 rbh
SCNpilot_cont_500_bf_scaffold_3128_7
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5773..6639
DNA (867bp) protein (289aa)
Probable transcriptional regulator protein, LysR family n=3 Tax=Rhizobium RepID=B3PZW1_RHIE6
LysR family transcriptional regulator
Probable transcriptional regulator protein, LysR family {ECO:0000313|EMBL:ACE92761.1}; TaxID=491916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CIAT 652).;"
SCNpilot_cont_500_bf_scaffold_3128_8
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6640..7695)
DNA (1056bp) protein (352aa)
threonine aldolase (EC:4.1.2.5); K01620 threonine aldolase [EC:4.1.2.5]
L-threonine aldolase {ECO:0000256|PIRNR:PIRNR038940}; EC=4.1.2.48 {ECO:0000256|PIRNR:PIRNR038940};; TaxID=395491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM1325).;"
threonine aldolase n=1 Tax=Rhizobium gallicum RepID=UPI00035EF7DC
SCNpilot_cont_500_bf_scaffold_3128_9
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8132..11284
DNA (3153bp) protein (1051aa)
Glutamate synthase (NADPH/NADH) large chain {ECO:0000313|EMBL:CDM59203.1}; EC=1.4.1.14 {ECO:0000313|EMBL:CDM59203.1};; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
gltB; glutamate synthase large subunit protein; K00265 glutamate synthase (NADPH/NADH) large chain [EC:1.4.1.13 1.4.1.14]
Glutamate synthase family protein n=1 Tax=Rhizobium sp. CF122 RepID=J2I8U0_9RHIZ
SCNpilot_cont_500_bf_scaffold_3128_10
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11359..12828
DNA (1470bp) protein (490aa)
gltB; glutamate synthase large subunit; K00265 glutamate synthase (NADPH/NADH) large chain [EC:1.4.1.13 1.4.1.14]
Glutamine amidotransferase class-II n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4FC84_9RHIZ
Glutamate synthase {ECO:0000313|EMBL:KGD92031.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
SCNpilot_cont_500_bf_scaffold_3128_11
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12888..14159
DNA (1272bp) protein (424aa)
Glutamate synthase subunit beta n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V8P9_9RHIZ
Glutamate synthase subunit beta {ECO:0000313|EMBL:ENN87397.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
glutamate synthase small subunit protein
Displaying 12 items

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