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SCNpilot_cont_500_bf_scaffold_3466

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3466_1
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(283..519)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JSE1_AGRVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM35634.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
SCNpilot_cont_500_bf_scaffold_3466_2
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(587..1384)
DNA (798bp) protein (266aa)
Inositol monophosphatase n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QVF1_9RHIZ rbh
Inositol monophosphatase {ECO:0000313|EMBL:EKF59192.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
inositol monophosphatase family protein
SCNpilot_cont_500_bf_scaffold_3466_3
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1384..2730)
DNA (1347bp) protein (449aa)
Modulator of DNA gyrase protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJI2_RHITR
modulator of DNA gyrase protein
Modulator of DNA gyrase protein {ECO:0000313|EMBL:AGB70220.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_3466_4
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2847..4655
DNA (1809bp) protein (603aa)
potassium transporter TrkA n=1 Tax=Rhizobium leguminosarum RepID=UPI00036E4A05
Glutathione-regulated potassium-efflux transporter protein KefB {ECO:0000313|EMBL:AJC78095.1}; TaxID=1432049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. phaseoli str. IE4803.;"
kefB; glutathione-regulated potassium-efflux system protein; K03455 monovalent cation:H+ antiporter-2, CPA2 family
SCNpilot_cont_500_bf_scaffold_3466_5
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4650..5489)
DNA (840bp) protein (280aa)
patatin n=1 Tax=Rhizobium mongolense RepID=UPI0003B5592B rbh
Patatin/phospholipase related protein {ECO:0000313|EMBL:AJD40257.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
patatin; K07001 NTE family protein
SCNpilot_cont_500_bf_scaffold_3466_6
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5486..6043)
DNA (558bp) protein (186aa)
methyltransferase (EC:2.1.1.-); K08316 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] rbh
Methyltransferase n=1 Tax=Agrobacterium sp. (strain H13-3) RepID=F0L6X1_AGRSH rbh
Uncharacterized protein {ECO:0000313|EMBL:CDN91702.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
SCNpilot_cont_500_bf_scaffold_3466_7
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6024..7997)
DNA (1974bp) protein (658aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
RNA pseudouridine synthase (EC:5.4.99.-) rbh
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI000361E8B8 rbh
SCNpilot_cont_500_bf_scaffold_3466_8
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8066..8524
DNA (459bp) protein (153aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Cytosine/adenosine deaminase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D455_9RHIZ
CMP/dCMP deaminase zinc-binding protein
SCNpilot_cont_500_bf_scaffold_3466_9
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8527..9036)
DNA (510bp) protein (170aa)
Acetyltransferase n=1 Tax=Rhizobium sp. CF080 RepID=J3BVB0_9RHIZ
Acetyltransferase {ECO:0000313|EMBL:CDN47994.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
N-acetyltransferase GCN5
SCNpilot_cont_500_bf_scaffold_3466_10
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9137..9757)
DNA (621bp) protein (207aa)
Uncharacterized protein n=2 Tax=Rhizobium meliloti RepID=K0PDA9_RHIML
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EHK73475.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
SCNpilot_cont_500_bf_scaffold_3466_11
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9903..10301)
DNA (399bp) protein (133aa)
ileS; isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5]
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
Isoleucine--tRNA ligase n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K1X8_AGRVS
Displaying 11 items

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