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SCNpilot_cont_500_bf_scaffold_3793

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3793_1
Aeromonas salmonicida, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..245)
DNA (243bp) protein (81aa)
MFS transporter n=1 Tax=Hoeflea sp. 108 RepID=UPI0003774BAC
MFS family transmembrane transport protein {ECO:0000313|EMBL:EQC03217.1}; TaxID=1324960 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas salmonicida subsp. pectinolytica 34mel.;"
major facilitator superfamily transporter
SCNpilot_cont_500_bf_scaffold_3793_2
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(233..745)
DNA (513bp) protein (171aa)
Uncharacterized protein n=3 Tax=Proteobacteria RepID=N7A1X5_9RHOO rbh
Phenylalanyl-tRNA synthetase beta subunit {ECO:0000313|EMBL:BAQ39167.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3793_3
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(749..1219)
DNA (471bp) protein (157aa)
Uncharacterized protein n=2 Tax=Aeromonas RepID=Q68E52_AERCA rbh
Thiol-disulfide isomerase {ECO:0000313|EMBL:BAQ39166.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3793_4
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1371..1676)
DNA (306bp) protein (102aa)
Uncharacterized protein n=3 Tax=Proteobacteria RepID=N6YVL9_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ENO98306.1}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3793_5
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1724..2155)
DNA (432bp) protein (144aa)
Uncharacterized protein n=3 Tax=Proteobacteria RepID=N6Z341_9RHOO
Pf03928 domain protein {ECO:0000313|EMBL:BAQ39165.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3793_6
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2229..3242)
DNA (1014bp) protein (338aa)
Putative zinc-binding dehydrogenase n=2 Tax=Aeromonas RepID=Q68E55_AERCA rbh
Putative zinc-binding dehydrogenase {ECO:0000313|EMBL:CAG15101.1}; TaxID=648 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas caviae (Aeromonas punctata).;"
alcohol dehydrogenase rbh
SCNpilot_cont_500_bf_scaffold_3793_7
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3848..4453
DNA (606bp) protein (202aa)
molybdopterin-binding protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003621145 rbh
Oxidoreductase, molybdopterin binding protein {ECO:0000313|EMBL:KEZ17870.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
molybdopterin binding oxidoreductase; K07147 rbh
SCNpilot_cont_500_bf_scaffold_3793_8
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4446..5189
DNA (744bp) protein (248aa)
oxidoreductase n=1 Tax=Hoeflea sp. 108 RepID=UPI000360D0F7 rbh
Oxidoreductase fad-binding region {ECO:0000313|EMBL:BAQ39161.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
oxidoreductase FAD-binding region rbh
SCNpilot_cont_500_bf_scaffold_3793_9
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5258..6523
DNA (1266bp) protein (422aa)
Acetyl-CoA C-acyltransferase; K00632 acetyl-CoA acyltransferase [EC:2.3.1.16] rbh
acetyl-CoA acyltransferase n=1 Tax=Hoeflea sp. 108 RepID=UPI00035FA6CE rbh
Acetyl-acyltransferase {ECO:0000313|EMBL:BAQ39160.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
SCNpilot_cont_500_bf_scaffold_3793_10
Acinetobacter ursingii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6636..6848
DNA (213bp) protein (71aa)
Glutaredoxin 3 n=1 Tax=Enterobacter cloacae UCICRE 12 RepID=V3CTN5_ENTCL
glutaredoxin; K03676 glutaredoxin 3
Glutaredoxin 3 {ECO:0000313|EMBL:ENV77965.1}; TaxID=1257043 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter ursingii ANC 3649.;"
SCNpilot_cont_500_bf_scaffold_3793_11
Pseudomonas sp. ES3-33, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6918..7199
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00038056D0
Uncharacterized protein {ECO:0000313|EMBL:KJH77299.1}; TaxID=1628833 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. ES3-33.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3793_12
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7370..7636
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035EDBC5
Uncharacterized protein {ECO:0000313|EMBL:ESL68321.1}; TaxID=1329856 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae UCICRE 12.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3793_13
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7835..8329
DNA (495bp) protein (165aa)
DNA-binding protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000371F6E3 rbh
Ferritin, Dps family protein {ECO:0000313|EMBL:KEZ17878.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
Dps family ferritin; K04047 starvation-inducible DNA-binding protein
SCNpilot_cont_500_bf_scaffold_3793_14
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8384..8914
DNA (531bp) protein (177aa)
peptide methionine sulfoxide reductase n=1 Tax=Hoeflea sp. 108 RepID=UPI0003759088 rbh
methionine sulfoxide reductase A
Methionine sulfoxide reductase A {ECO:0000313|EMBL:ABF51841.1}; Flags: Precursor;; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;"
SCNpilot_cont_500_bf_scaffold_3793_15
unknown

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8920..9075
DNA (156bp) protein (52aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036FC202
SCNpilot_cont_500_bf_scaffold_3793_16
Mesorhizobium sp. LNJC372A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9138..9569)
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003661BBD
Uncharacterized protein {ECO:0000313|EMBL:ESY51775.1}; TaxID=1287256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC372A00.;"
Displaying 16 items

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