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SCNpilot_cont_500_bf_scaffold_6302

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_6302_1
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(80..808)
DNA (729bp) protein (243aa)
hydantoin racemase; K01797 [EC:5.1.99.-]
Putative hydantoin racemase n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9SI70_9RHOB
Putative hydantoin racemase {ECO:0000313|EMBL:KHQ51279.1}; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticoccus.;" source="Ponticoccus sp. UMTAT08.;"
SCNpilot_cont_500_bf_scaffold_6302_2
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(843..1649)
DNA (807bp) protein (269aa)
Spermidine Putrescine ABC transporter permease component potC n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9R253_9RHOB rbh
Spermidine Putrescine ABC transporter permease component potC {ECO:0000313|EMBL:KHQ51280.1}; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticoccus.;" source="Ponticoccus sp. UMTAT08.;"
spermidine/putrescine transport system, permease protein
SCNpilot_cont_500_bf_scaffold_6302_3
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1646..2503)
DNA (858bp) protein (286aa)
Hypothetical polyamine ABC transporter, permease protein n=1 Tax=Sagittula stellata E-37 RepID=A3K344_9RHOB rbh
Putative polyamine ABC transporter, permease protein {ECO:0000313|EMBL:KHQ51281.1}; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticoccus.;" source="Ponticoccus sp. UMTAT08.;"
Binding-protein-dependent transport systems inner membrane component; K02054 putative spermidine/putrescine transport system permease protein
SCNpilot_cont_500_bf_scaffold_6302_4
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2500..3570)
DNA (1071bp) protein (357aa)
ABC transporter-like protein; K02010 iron(III) transport system ATP-binding protein [EC:3.6.3.30] rbh
Uridine kinase:ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase n=1 Tax=Sagittula stellata E-37 RepID=A3K345_9RHOB rbh
Uridine kinase:ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase {ECO:0000313|EMBL:KHQ51282.1}; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticoccus.;" source="Ponticoccus sp. UMTAT08.;"
SCNpilot_cont_500_bf_scaffold_6302_5
Sagittula stellata, Sagittula, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3575..4531)
DNA (957bp) protein (319aa)
ABC transporter substrate-binding protein n=1 Tax=Sagittula stellata E-37 RepID=A3K346_9RHOB rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:EBA08605.1}; TaxID=388399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sagittula.;" source="Sagittula stellata E-37.;"
potD2; putative ABC transporter, spermidine/putrescine-binding protein PotD
SCNpilot_cont_500_bf_scaffold_6302_6
Sagittula stellata, Sagittula, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4632..6335)
DNA (1704bp) protein (568aa)
Acetolactate synthase II large subunit {ECO:0000313|EMBL:EBA08606.1}; EC=2.2.1.6 {ECO:0000313|EMBL:EBA08606.1};; TaxID=388399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sagittula.;" source="Sagittula stellata E-37.;"
Acetolactate synthase II large subunit n=1 Tax=Sagittula stellata E-37 RepID=A3K347_9RHOB rbh
putative acetolactate synthase
SCNpilot_cont_500_bf_scaffold_6302_7
unknown

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6495..6620
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_6302_8
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6589..7101)
DNA (513bp) protein (171aa)
UPI0003CF5B2D related cluster n=1 Tax=unknown RepID=UPI0003CF5B2D
nocMc; nopaline ABC transporter permease; K10019 octopine/nopaline transport system permease protein
Nopaline ABC transporter, permease protein {ECO:0000313|EMBL:ACE94943.1}; TaxID=491916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CIAT 652).;"
SCNpilot_cont_500_bf_scaffold_6302_9
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7113..7370)
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00037671FD
nocQ; nopaline ABC transporter; K10020 octopine/nopaline transport system permease protein
Nopaline ABC transporter {ECO:0000313|EMBL:ACM28420.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;"
SCNpilot_cont_500_bf_scaffold_6302_10
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7380..7643)
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00037671FD
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:EHS52799.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
nocQ; nopaline ABC transporter; K10020 octopine/nopaline transport system permease protein
SCNpilot_cont_500_bf_scaffold_6302_11
unknown

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comp(7594..7770)
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_6302_12
Pantoea sp. BL1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7784..8080)
DNA (297bp) protein (99aa)
octopine ABC transporter ATP-binding protein; K10021 octopine/nopaline transport system ATP-binding protein [EC:3.6.3.-]
hypothetical protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00036EA286
Amino acid transporter {ECO:0000313|EMBL:KJV49780.1}; TaxID=1628190 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. BL1.;"
SCNpilot_cont_500_bf_scaffold_6302_13
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8255..10540
DNA (2286bp) protein (762aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NRR5_9BRAD
multi-sensor Signal transduction histidine kinase
SCNpilot_cont_500_bf_scaffold_6302_14
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10577..11050)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P036_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS31788.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
transcriptional regulator
SCNpilot_cont_500_bf_scaffold_6302_15
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11080..11436)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NN90_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS31787.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
two component, response regulator
SCNpilot_cont_500_bf_scaffold_6302_16
unknown

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11580..11831
DNA (252bp) protein (84aa)

This feature has no annotations

Displaying 16 items

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