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SCNpilot_cont_500_bf_scaffold_6304

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_6304_1
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..315)
DNA (315bp) protein (105aa)
HIT family hydrolase, diadenosine tetraphosphate hydrolase n=1 Tax=Rhizobium sp. CF080 RepID=J2IIT4_9RHIZ
Hit1 protein {ECO:0000313|EMBL:CDN56554.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
conserved hypothetical protein; putative Histidine triad (HIT) protein
SCNpilot_cont_500_bf_scaffold_6304_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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604..2463
DNA (1860bp) protein (620aa)
DNA polymerase III, subunits gamma and tau {ECO:0000313|EMBL:EYR84161.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EYR84161.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
dnaX; DNA polymerase III subunits gamma and tau; K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
DNA polymerase III subunits gamma and tau n=1 Tax=Rhizobium sp. Pop5 RepID=K0VDM3_9RHIZ
SCNpilot_cont_500_bf_scaffold_6304_3
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2486..2809
DNA (324bp) protein (108aa)
Nucleoid-associated protein PMI07_05630 n=1 Tax=Rhizobium sp. CF080 RepID=J2HZ10_9RHIZ
Nucleoid-associated protein ybaB {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
hypothetical protein; K09747 hypothetical protein
SCNpilot_cont_500_bf_scaffold_6304_4
Ricinus communis, Ricinus, Malpighiales, rosids, Streptophyta, Viridiplantae

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comp(2810..3697)
DNA (888bp) protein (296aa)
Putative uncharacterized protein n=1 Tax=Ricinus communis RepID=B9T9P9_RICCO
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EEF27418.1}; TaxID=3988 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus.;" source="Ricinus communis (Castor bean).;"
SCNpilot_cont_500_bf_scaffold_6304_5
unknown

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3773..4336
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002FE17FE
Transcriptional regulator, TetR family {ECO:0000313|EMBL:CPR22292.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
TetR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_6304_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4385..4996
DNA (612bp) protein (204aa)
Putative amino acid efflux transmembrane protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D7P1_9RHIZ
Putative amino acid efflux transmembrane protein {ECO:0000313|EMBL:EYR84159.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative amino acid efflux transmembrane protein
SCNpilot_cont_500_bf_scaffold_6304_7
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4993..5601)
DNA (609bp) protein (203aa)
MOSC domain containing protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F4G2_9RHIZ
MOSC domain-containing protein
MOSC domain containing protein {ECO:0000313|EMBL:EHS52483.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
SCNpilot_cont_500_bf_scaffold_6304_8
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5660..6265
DNA (606bp) protein (202aa)
Recombination protein RecR n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EZ78_9RHIZ rbh
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
recR; recombination protein RecR
SCNpilot_cont_500_bf_scaffold_6304_9
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6403..7422
DNA (1020bp) protein (340aa)
Lytic murein transglycosylase n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM1325) RepID=C6B227_RHILS
lytic murein transglycosylase
Lytic murein transglycosylase {ECO:0000313|EMBL:ACS58631.1}; TaxID=395491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM1325).;"
SCNpilot_cont_500_bf_scaffold_6304_10
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7561..8163
DNA (603bp) protein (201aa)
Ribosome maturation factor RimP n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q614_9RHIZ rbh
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
ribosome maturation factor rimP
SCNpilot_cont_500_bf_scaffold_6304_11
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8228..8794
DNA (567bp) protein (189aa)
Transcription elongation protein NusA n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3XFC2_RHIFR
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
nusA; transcription elongation protein NusA
Displaying 11 items

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