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SCNpilot_cont_500_bf_scaffold_6327

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_6327_1
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..912
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2P4F7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF42251.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_6327_2
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1895..3172
DNA (1278bp) protein (426aa)
Conjugal transfer coupling protein TraG n=1 Tax=Nitratireductor indicus C115 RepID=K2NSE3_9RHIZ
Conjugal transfer coupling protein TraG {ECO:0000313|EMBL:EKF42250.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
conjugal transfer coupling protein TraG; K03205 type IV secretion system protein VirD4
SCNpilot_cont_500_bf_scaffold_6327_3
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3198..3500
DNA (303bp) protein (101aa)
CopG family transcriptional regulator n=1 Tax=Nitratireductor indicus C115 RepID=K2NWQ2_9RHIZ
CopG family transcriptional regulator {ECO:0000313|EMBL:EKF42249.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
CopG family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_6327_4
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3702..4553
DNA (852bp) protein (284aa)
P-type conjugative transfer ATPase TrbB n=1 Tax=Nitratireductor indicus C115 RepID=K2N4E4_9RHIZ
P-type conjugative transfer ATPase TrbB {ECO:0000313|EMBL:EKF42248.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
P-type conjugative transfer ATPase TrbB; K03196 type IV secretion system protein VirB11
SCNpilot_cont_500_bf_scaffold_6327_5
Sphingobium sp. HDIP04, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4550..4882
DNA (333bp) protein (111aa)
Conjugal transfer protein TrbC n=4 Tax=Alphaproteobacteria RepID=C8WDW1_ZYMMN
conjugal transfer protein Trbc; K03197 type IV secretion system protein VirB2
Conjugal transfer protein TrbC {ECO:0000313|EMBL:EQB00579.1}; TaxID=428994 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. HDIP04.;"
SCNpilot_cont_500_bf_scaffold_6327_6
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4882..5163
DNA (282bp) protein (94aa)
Conjugal transfer protein TrbB n=1 Tax=Nitratireductor indicus C115 RepID=K2P4F3_9RHIZ
Conjugal transfer protein TrbB {ECO:0000313|EMBL:EKF42246.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
conjugal transfer protein TrbB; K03198 type IV secretion system protein VirB3
SCNpilot_cont_500_bf_scaffold_6327_7
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5174..7681
DNA (2508bp) protein (836aa)
Conjugal transfer ATPase TrbE n=1 Tax=Nitratireductor indicus C115 RepID=K2NSD8_9RHIZ rbh
Conjugal transfer ATPase TrbE {ECO:0000313|EMBL:EKF42245.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
conjugal transfer ATPase TrbE; K03199 type IV secretion system protein VirB4 rbh
SCNpilot_cont_500_bf_scaffold_6327_8
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7678..8460
DNA (783bp) protein (261aa)
P-type conjugative transfer protein TrbJ n=2 Tax=Alphaproteobacteria RepID=C8WDW4_ZYMMN rbh
conjugal transfer protein TrbJ rbh
Conjugal transfer protein TrbJ {ECO:0000313|EMBL:EKF42244.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
SCNpilot_cont_500_bf_scaffold_6327_9
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8481..8768
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2N4D9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF42243.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_6327_10
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8772..10022
DNA (1251bp) protein (417aa)
Conjugal transfer protein TrbL n=1 Tax=Nitratireductor indicus C115 RepID=K2PMD2_9RHIZ rbh
Conjugal transfer protein TrbL {ECO:0000313|EMBL:EKF42242.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
conjugal transfer protein TrbL; K07344 type IV secretion system protein TrbL rbh
SCNpilot_cont_500_bf_scaffold_6327_11
Sphingobium chinhatense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10071..10760
DNA (690bp) protein (230aa)
Conjugal transfer protein n=1 Tax=Zymomonas mobilis subsp. mobilis (strain NCIB 11163) RepID=C8WDW7_ZYMMN rbh
conjugal transfer protein TrbF; K03200 type IV secretion system protein VirB5 rbh
Conjugal transfer protein TrbF {ECO:0000313|EMBL:EPR17229.1}; TaxID=1346790 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chinhatense IP26.;"
SCNpilot_cont_500_bf_scaffold_6327_12
Haematobacter missouriensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10757..11770
DNA (1014bp) protein (338aa)
P-type conjugative transfer protein TrbG n=1 Tax=Zymomonas mobilis subsp. mobilis (strain NCIB 11163) RepID=C8WDW8_ZYMMN rbh
P-type conjugative transfer protein TrbG; K03204 type IV secretion system protein VirB9 rbh
Conjugal transfer protein TrbG {ECO:0000313|EMBL:KFI26668.1}; TaxID=366616 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter missouriensis.;"
SCNpilot_cont_500_bf_scaffold_6327_13
Haematobacter missouriensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11767..12900
DNA (1134bp) protein (378aa)
Conjugation TrbI family protein n=1 Tax=Zymomonas mobilis subsp. mobilis (strain NCIB 11163) RepID=C8WDW9_ZYMMN rbh
conjugation TrbI family protein; K03195 type IV secretion system protein VirB10 rbh
Conjugal transfer protein TraI {ECO:0000313|EMBL:KFI26667.1}; TaxID=366616 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter missouriensis.;"
SCNpilot_cont_500_bf_scaffold_6327_14
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13013..13801
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2P4D7_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EKF42226.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
Displaying 14 items

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