ggKbase home page

SCNpilot_cont_500_bf_scaffold_6375

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_6375_1
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..246)
DNA (246bp) protein (82aa)
Carbamoyl-phosphate synthase large chain {ECO:0000256|HAMAP-Rule:MF_01210}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01210};; Carbamoyl-phosphate synthetase ammonia chain {ECO:0000256|HAMAP-Rule:MF_01210}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
carB; carbamoyl phosphate synthase large subunit (EC:6.3.5.5); K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
Carbamoyl-phosphate synthase large chain n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CQT1_9RHIZ
SCNpilot_cont_500_bf_scaffold_6375_2
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

541..1476
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CCGE 510 RepID=J5Q9V3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJT05918.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_6375_3
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1485..2306)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V9Y6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN87877.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_6375_4
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2375..2890
DNA (516bp) protein (172aa)
Putative membrane protein n=1 Tax=Rhizobium sp. CF080 RepID=J2SU60_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EUB96468.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_6375_5
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2945..3853
DNA (909bp) protein (303aa)
Putative metalloprotease n=1 Tax=Rhizobium sp. CF080 RepID=J2JMP1_9RHIZ rbh
Zinc protease {ECO:0000313|EMBL:CDN48633.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
hypothetical protein; K07054 rbh
SCNpilot_cont_500_bf_scaffold_6375_6
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3896..4888)
DNA (993bp) protein (331aa)
aldo/keto reductase n=1 Tax=Rhizobium meliloti RepID=UPI000369AB6F
putative oxidoreductase, aldo/keto reductase family
Putative oxidoreductase, aldo/keto reductase family {ECO:0000313|EMBL:CCE95967.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
SCNpilot_cont_500_bf_scaffold_6375_7
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4988..5926
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI0003723D36
putative LysR family transcriptional regulator
Putative LysR family transcriptional regulator {ECO:0000313|EMBL:CCE95968.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
SCNpilot_cont_500_bf_scaffold_6375_8
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6375..7436
DNA (1062bp) protein (354aa)
Putative transport transmembrane protein n=1 Tax=Sinorhizobium meliloti CCNWSX0020 RepID=H0G0K1_RHIML
Putative transport transmembrane protein {ECO:0000313|EMBL:EHK77189.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
major facilitator superfamily protein; K08151 MFS transporter, DHA1 family, tetracycline resistance protein
SCNpilot_cont_500_bf_scaffold_6375_9
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7712..8398
DNA (687bp) protein (229aa)
multidrug transporter MatE n=1 Tax=Rhizobium leguminosarum RepID=UPI000366CA36
Multidrug transporter MatE {ECO:0000313|EMBL:AHF84953.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM1689.;"
MATE efflux family protein; K03327 multidrug resistance protein, MATE family
SCNpilot_cont_500_bf_scaffold_6375_10
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8395..9018
DNA (624bp) protein (208aa)
MATE efflux family protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4FDZ6_9RHIZ
MATE efflux family protein {ECO:0000313|EMBL:EHS49005.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
MATE efflux family protein; K03327 multidrug resistance protein, MATE family
SCNpilot_cont_500_bf_scaffold_6375_11
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9061..10266)
DNA (1206bp) protein (402aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;"
carA; carbamoyl phosphate synthase small subunit (EC:6.3.5.5); K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
Carbamoyl-phosphate synthase small chain n=1 Tax=Rhizobium sp. Pop5 RepID=K0W7R3_9RHIZ
SCNpilot_cont_500_bf_scaffold_6375_12
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10318..10941
DNA (624bp) protein (208aa)
aspartyl-tRNA amidotransferase subunit B n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000360C1A8
GatB family aspartyl/glutamyl-tRNA amidotransferase protein {ECO:0000313|EMBL:AJD41926.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
hypothetical protein; K09117 hypothetical protein
SCNpilot_cont_500_bf_scaffold_6375_13
Rhizobium sp. R1-200B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11390..11743
DNA (354bp) protein (118aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1509405 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R1-200B4.;"
dnaG; DNA primase (EC:2.7.7.-); K02316 DNA primase [EC:2.7.7.-]
DNA primase n=1 Tax=Rhizobium sp. RepID=L0NFX6_RHISP
Displaying 13 items

View Taxonomy