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SCNpilot_cont_500_bf_scaffold_6454

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_6454_1
unknown

Not on your lists

comp(2..112)
DNA (111bp) protein (37aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_6454_2
unknown

Not on your lists

comp(499..834)
DNA (336bp) protein (112aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_6454_3
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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870..1184
DNA (315bp) protein (105aa)
Rcorf104 n=1 Tax=Agrobacterium rhizogenes RepID=Q9F5B4_AGRRH
Rcorf104 {ECO:0000313|EMBL:ABW33661.1}; Riorf138 protein {ECO:0000313|EMBL:BAB16257.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_6454_4
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1301..1555)
DNA (255bp) protein (85aa)
Transposase IS66 n=1 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WJJ7_9RHIZ
Transposase IS66 {ECO:0000313|EMBL:EEQ95225.1}; TaxID=641118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium LMG 3301.;"
IS66 insertion sequence transposase
SCNpilot_cont_500_bf_scaffold_6454_5
unknown

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comp(1577..1741)
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_6454_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2312..2590
DNA (279bp) protein (93aa)
UPI0003CE7F6A related cluster n=1 Tax=unknown RepID=UPI0003CE7F6A
Transposase {ECO:0000313|EMBL:EYR78526.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative transposase
SCNpilot_cont_500_bf_scaffold_6454_7
Burkholderia graminis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2961..3263)
DNA (303bp) protein (101aa)
Antibiotic biosynthesis monooxygenase n=1 Tax=Burkholderia graminis C4D1M RepID=B1GAV9_9BURK
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:EDT06723.1}; TaxID=396598 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia graminis C4D1M.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_6454_8
Burkholderia graminis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3318..3956)
DNA (639bp) protein (213aa)
Dimethylmenaquinone methyltransferase n=1 Tax=Burkholderia graminis C4D1M RepID=B1GAV8_9BURK rbh
Dimethylmenaquinone methyltransferase {ECO:0000313|EMBL:EDT06722.1}; TaxID=396598 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia graminis C4D1M.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_6454_9
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4115..5128)
DNA (1014bp) protein (338aa)
Zinc-binding alcohol dehydrogenase family protein n=1 Tax=Burkholderia graminis C4D1M RepID=B1GAV7_9BURK rbh
NADPH:quinone reductase {ECO:0000313|EMBL:KJC46336.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
zinc-binding dehydrogenase
SCNpilot_cont_500_bf_scaffold_6454_10
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5274..6464)
DNA (1191bp) protein (397aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000369FBE9 rbh
Bradyrhizobium elkanii strain UASWS1015 Contig186, whole genome shotgun sequence {ECO:0000313|EMBL:KIU44202.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
Peptidase rbh
SCNpilot_cont_500_bf_scaffold_6454_11
Burkholderia graminis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6577..6909)
DNA (333bp) protein (111aa)
Flavin reductase domain protein FMN-binding n=1 Tax=Burkholderia graminis C4D1M RepID=B1G9I8_9BURK
Flavin reductase domain protein FMN-binding {ECO:0000313|EMBL:EDT07179.1}; TaxID=396598 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia graminis C4D1M.;"
Displaying 11 items

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