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SCNpilot_cont_500_bf_scaffold_6692

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_6692_1
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1..1362
DNA (1362bp) protein (454aa)
tfdB; 2,4-dichlorophenol 6-monooxygenase (EC:1.14.13.20)
2,4-dichlorophenol 6-monooxygenase {ECO:0000313|EMBL:CAN97191.1}; EC=1.14.13.20 {ECO:0000313|EMBL:CAN97191.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
2,4-dichlorophenol 6-monooxygenase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GY62_SORC5
SCNpilot_cont_500_bf_scaffold_6692_2
unknown

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comp(1492..1815)
DNA (324bp) protein (108aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_6692_3
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1876..3915)
DNA (2040bp) protein (680aa)
Acyl-CoA synthetase n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5YE77_PARAH rbh
acyl-CoA synthetase rbh
Acyl-CoA synthetase {ECO:0000313|EMBL:AGT09788.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
SCNpilot_cont_500_bf_scaffold_6692_4
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4015..4674)
DNA (660bp) protein (220aa)
Transcriptional regulator, TetR family n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5XWU9_PARAH
transcriptional regulator, TetR family
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AGT09787.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
SCNpilot_cont_500_bf_scaffold_6692_5
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4702..5859)
DNA (1158bp) protein (386aa)
acyl-CoA dehydrogenase (EC:1.3.8.3) rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AGT09786.1}; EC=1.3.8.3 {ECO:0000313|EMBL:AGT09786.1};; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
Acyl-CoA dehydrogenase n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5YX41_PARAH rbh
SCNpilot_cont_500_bf_scaffold_6692_6
Brucella pinnipedialis, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5871..6659)
DNA (789bp) protein (263aa)
putative enoyl-CoA hydratase/isomerase; K15866 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] rbh
Enoyl-CoA hydratase-like protein n=6 Tax=Brucella RepID=C9U1K3_BRUPB rbh
Enoyl-CoA hydratase {ECO:0000313|EMBL:EEZ29055.1}; TaxID=520462 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella pinnipedialis M292/94/1.;"
SCNpilot_cont_500_bf_scaffold_6692_7
Brucella sp. F5/99, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6696..7511)
DNA (816bp) protein (272aa)
caiD; carnitinyl-CoA dehydratase (EC:4.2.1.-); K08299 carnitinyl-CoA dehydratase [EC:4.2.1.-] rbh
Crotonobetainyl-CoA-hydratase n=5 Tax=Brucella RepID=C9U1K4_BRUPB rbh
Crotonobetainyl-CoA-hydratase {ECO:0000313|EMBL:EEY24708.1}; TaxID=437701 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella sp. F5/99.;"
SCNpilot_cont_500_bf_scaffold_6692_8
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7513..8046)
DNA (534bp) protein (178aa)
Spermidine/putrescine transport system, permease protein n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5YE72_PARAH
spermidine/putrescine transport system, permease protein
Spermidine/putrescine transport system, permease protein {ECO:0000313|EMBL:AGT09783.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
SCNpilot_cont_500_bf_scaffold_6692_9
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8241..9167)
DNA (927bp) protein (309aa)
Spermidine/putrescine transport system, permease protein n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5XWU4_PARAH rbh
spermidine/putrescine transport system, permease protein rbh
Spermidine/putrescine transport system, permease protein {ECO:0000313|EMBL:AGT09782.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
SCNpilot_cont_500_bf_scaffold_6692_10
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9171..10268)
DNA (1098bp) protein (366aa)
spermidine/putrescine transport system, ATP-binding protein (EC:3.6.3.31) rbh
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
Spermidine/putrescine transport system, ATP-binding protein n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5YX35_PARAH rbh
SCNpilot_cont_500_bf_scaffold_6692_11
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10343..11374)
DNA (1032bp) protein (344aa)
Spermidine/putrescine transport system, substrate-binding protein n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5Y215_PARAH rbh
spermidine/putrescine transport system, substrate-binding protein rbh
Spermidine/putrescine transport system, substrate-binding protein {ECO:0000313|EMBL:AGT09780.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
SCNpilot_cont_500_bf_scaffold_6692_12
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11505..13082
DNA (1578bp) protein (526aa)
hypothetical protein; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
Thiamine pyrophosphate enzyme domain protein TPP-binding n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WJ79_VEREI
Uncharacterized protein {ECO:0000313|EMBL:KGD89205.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. RTa.;"
SCNpilot_cont_500_bf_scaffold_6692_13
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13147..13740)
DNA (594bp) protein (198aa)
SAM-dependent methyltransferase protein n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5S5J8_RHIET rbh
SAM-dependent methyltransferase protein rbh
SAM-dependent methyltransferase protein {ECO:0000313|EMBL:AGS25205.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;"
SCNpilot_cont_500_bf_scaffold_6692_14
Rhizobium sp. R2-400B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13986..15125
DNA (1140bp) protein (380aa)
Peptidase S10 serine carboxypeptidase n=1 Tax=Rhizobium sp. RepID=L0NKW1_RHISP
Carboxypeptidase {ECO:0000313|EMBL:KEQ10680.1}; TaxID=1509404 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R2-400B4.;"
peptidase S10 serine carboxypeptidase
Displaying 14 items

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