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SCNpilot_cont_500_bf_scaffold_6757

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_6757_1
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(24..1067)
DNA (1044bp) protein (348aa)
ABC-type Fe3+-siderophore transport system, permease component n=1 Tax=Rhizobium sp. CF080 RepID=J2IV09_9RHIZ
Iron ABC transporter permease {ECO:0000313|EMBL:KGE02023.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
Fe3+ siderophore ABC transporter permease; K02015 iron complex transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_6757_2
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1064..2062)
DNA (999bp) protein (333aa)
ABC-type Fe3+-hydroxamate transport system, periplasmic component n=1 Tax=Rhizobium sp. CF142 RepID=J2B5K2_9RHIZ rbh
ABC-type Fe3+-hydroxamate transport system, periplasmic component {ECO:0000313|EMBL:EJJ31345.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
Iron ABC transporter periplasmic solute-binding protein rbh
SCNpilot_cont_500_bf_scaffold_6757_3
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2224..4431
DNA (2208bp) protein (736aa)
TonB-dependent siderophore receptor n=1 Tax=Rhizobium sp. CF142 RepID=J1THA9_9RHIZ rbh
TonB-dependent siderophore receptor {ECO:0000313|EMBL:EJJ31346.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
TonB-dependent siderophore receptor; K02014 iron complex outermembrane recepter protein rbh
SCNpilot_cont_500_bf_scaffold_6757_4
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4477..5352)
DNA (876bp) protein (292aa)
DNA-binding domain-containing protein, AraC-type n=1 Tax=Rhizobium sp. CF080 RepID=J2JFD1_9RHIZ rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EUB98576.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
AraC family transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_6757_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5783..6046
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CRT8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR79199.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_6757_6
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6245..6964
DNA (720bp) protein (240aa)
cation transporter n=1 Tax=Rhizobium leguminosarum RepID=UPI00037C80F6
Putative membrane protein {ECO:0000313|EMBL:EJC76574.1}; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;"
MgtC/SapB family transporter protein
SCNpilot_cont_500_bf_scaffold_6757_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7053..7919
DNA (867bp) protein (289aa)
LysR family transcriptional regulator n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EFH5_9RHIZ rbh
Transcriptional regulator {ECO:0000313|EMBL:EYR82823.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
LysR family transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_6757_8
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7974..8594)
DNA (621bp) protein (207aa)
transcriptional regulator n=1 Tax=Rhizobium meliloti RepID=UPI0003752D47
Transcription regulator GntR family
Transcription regulator GntR family {ECO:0000313|EMBL:AEH80007.1}; TaxID=707241 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain SM11).;"
SCNpilot_cont_500_bf_scaffold_6757_9
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8726..9442
DNA (717bp) protein (239aa)
Asp/Glu racemase; K01797 [EC:5.1.99.-] rbh
Asp/Glu/hydantoin racemase n=1 Tax=Sinorhizobium medicae RepID=UPI00035E25CA rbh
Asp/Glu racemase {ECO:0000313|EMBL:ABR64489.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
SCNpilot_cont_500_bf_scaffold_6757_10
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9476..9910)
DNA (435bp) protein (145aa)
AsnC family transcriptional regulator n=1 Tax=Rhizobium giardinii RepID=UPI00037BDB1B
AsnC family transcriptional regulator {ECO:0000313|EMBL:KDP70356.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
Transcription regulator AsnC family
SCNpilot_cont_500_bf_scaffold_6757_11
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10038..13088
DNA (3051bp) protein (1017aa)
Alanine--glyoxylate transaminase n=6 Tax=Rhizobium meliloti RepID=F6BSK0_SINMB rbh
4-aminobutyrate aminotransferase {ECO:0000313|EMBL:EYR78644.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
class III aminotransferase rbh
SCNpilot_cont_500_bf_scaffold_6757_12
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13250..13915)
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI000377B021 rbh
Gamma-glutamyl-gamma-aminobutyrate hydrolase {ECO:0000313|EMBL:KDP74624.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
peptidase C26; K07010 putative glutamine amidotransferase
Displaying 12 items

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