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SCNpilot_cont_500_bf_scaffold_6812

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_6812_1
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..609
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI00036FA558
LuxR family transcriptional regulator {ECO:0000313|EMBL:KKB76843.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
LuxR family transcriptional regulator/sensory box protein
SCNpilot_cont_500_bf_scaffold_6812_2
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(627..1487)
DNA (861bp) protein (287aa)
transporter n=1 Tax=Bradyrhizobium elkanii RepID=UPI00037EC147 rbh
Dihydroorotate dehydrogenase (Fumarate) {ECO:0000313|EMBL:ERF84990.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_6812_3
Paracoccus halophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1604..3052
DNA (1449bp) protein (483aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HKL5_9BRAD
GntR family transcriptional regulator {ECO:0000313|EMBL:KGJ02912.1}; TaxID=376733 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus halophilus.;"
HTH-type transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_6812_4
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3142..4197
DNA (1056bp) protein (352aa)
Acyltransferase/acetyltransferase n=1 Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FNZ3_PELBH
Uncharacterized protein {ECO:0000313|EMBL:KFL31622.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
acyltransferase, putative
SCNpilot_cont_500_bf_scaffold_6812_5
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4419..5867
DNA (1449bp) protein (483aa)
nitrate reductase n=1 Tax=Rhizobium leguminosarum RepID=UPI0003798BEB rbh
permease for cytosine/purines uracil thiamine allantoin; K03457 nucleobase:cation symporter-1, NCS1 family rbh
Permease for cytosine/purines uracil thiamine allantoin {ECO:0000313|EMBL:ACI58551.1}; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM2304).;"
SCNpilot_cont_500_bf_scaffold_6812_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6116..7114)
DNA (999bp) protein (333aa)
Phosphate acetyltransferase Pta {ECO:0000313|EMBL:EYR79266.1}; EC=2.3.1.8 {ECO:0000313|EMBL:EYR79266.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
pta2; putative phosphate acetyltransferase protein; K00625 phosphate acetyltransferase [EC:2.3.1.8] rbh
Phosphate acetyltransferase Pta n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D3L4_9RHIZ rbh
SCNpilot_cont_500_bf_scaffold_6812_7
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7114..8151)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CUL7_9RHIZ rbh
Membrane protein {ECO:0000313|EMBL:KDP75645.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_6812_8
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8225..10000)
DNA (1776bp) protein (592aa)
Putative sulfoacetaldehyde acetyltransferase Xsc {ECO:0000313|EMBL:EYR79268.1}; EC=2.3.3.15 {ECO:0000313|EMBL:EYR79268.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
ilvB2; sulfoacetaldehyde acetyltransferase; K03852 sulfoacetaldehyde acetyltransferase [EC:2.3.3.15] rbh
Putative sulfoacetaldehyde acetyltransferase Xsc n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CEN6_9RHIZ rbh
SCNpilot_cont_500_bf_scaffold_6812_9
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10037..11437)
DNA (1401bp) protein (467aa)
Gamma-glutamylputrescine oxidoreductase PuuB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EW24_9RHIZ rbh
FAD-dependent oxidoreductase {ECO:0000313|EMBL:KDP75647.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
FAD dependent oxidoreductase rbh
SCNpilot_cont_500_bf_scaffold_6812_10
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11454..11675)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CYX3_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:KDP75648.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_6812_11
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11875..12606)
DNA (732bp) protein (244aa)
Taurine transport system permease protein TauC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D3L9_9RHIZ rbh
Taurine transport system permease protein TauC {ECO:0000313|EMBL:EYR79271.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
binding-protein-dependent transport system inner membrane protein; K15552 taurine transport system permease protein
Displaying 11 items

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