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SCNpilot_cont_500_bf_scaffold_6876

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_6876_1
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..1231)
DNA (1230bp) protein (410aa)
ABC transporter related n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X7I0_OCHA4
ABC transporter related; K01995 branched-chain amino acid transport system ATP-binding protein; K01998 branched-chain amino acid transport system permease protein
ABC transporter related {ECO:0000313|EMBL:ABS17184.1}; Flags: Precursor;; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
SCNpilot_cont_500_bf_scaffold_6876_2
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1399..2280
DNA (882bp) protein (294aa)
Transcriptional regulator, RpiR family n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X7I1_OCHA4 rbh
RpiR family transcriptional regulator rbh
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:ABS17185.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
SCNpilot_cont_500_bf_scaffold_6876_3
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2324..2986
DNA (663bp) protein (221aa)
Isochorismatase hydrolase n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X7I2_OCHA4 rbh
isochorismatase hydrolase rbh
Isochorismatase hydrolase {ECO:0000313|EMBL:ABS17186.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
SCNpilot_cont_500_bf_scaffold_6876_4
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3004..4350
DNA (1347bp) protein (449aa)
glutamine synthetase catalytic region; K01915 glutamine synthetase [EC:6.3.1.2]
Glutamine synthetase catalytic region n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V669_9RHIZ
Glutamine synthetase catalytic region {ECO:0000313|EMBL:ENN86527.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
SCNpilot_cont_500_bf_scaffold_6876_5
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4362..5180
DNA (819bp) protein (273aa)
N-formylglutamate amidohydrolase n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X7I4_OCHA4 rbh
N-formylglutamate amidohydrolase rbh
N-formylglutamate amidohydrolase {ECO:0000313|EMBL:ABS17188.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
SCNpilot_cont_500_bf_scaffold_6876_6
Achromobacter obae, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5177..6397
DNA (1221bp) protein (407aa)
2-aminohexano-6-lactam racemase; EC=5.1.1.15;; 2-amino-hexano-6-lactam racemase; Alpha-amino-epsilon-caprolactam racemase; TaxID=37486 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter obae.;"
Alpha-amino-epsilon-caprolactam racemase n=1 Tax=Achromobacter obae RepID=Q7M181_9BURK
aminotransferase class-III
SCNpilot_cont_500_bf_scaffold_6876_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6701..7402)
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI00036A4E4C
GntR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
SCNpilot_cont_500_bf_scaffold_6876_8
Pseudomonas taeanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7654..8079)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI00036C9BC5
ATP:cob(I)alamin adenosyltransferase {ECO:0000313|EMBL:KFX67379.1}; TaxID=1395571 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas taeanensis MS-3.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_6876_9
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8121..9737)
DNA (1617bp) protein (539aa)
choline dehydrogenase (EC:1.1.99.1); K00119 [EC:1.1.99.-]
Choline dehydrogenase {ECO:0000313|EMBL:ADU37990.1}; EC=1.1.99.1 {ECO:0000313|EMBL:ADU37990.1};; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
Choline dehydrogenase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V1Y7_VARPE
SCNpilot_cont_500_bf_scaffold_6876_10
Ochrobactrum sp. CDB2, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9734..11362)
DNA (1629bp) protein (543aa)
choline dehydrogenase (EC:1.1.99.1)
Glucose-methanol-choline oxidoreductase n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3KB67_9RHIZ
Glucose-methanol-choline oxidoreductase {ECO:0000313|EMBL:EMG52079.1}; TaxID=360313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. CDB2.;"
Displaying 10 items

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