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SCNpilot_cont_500_bf_scaffold_3230_8

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 8248..9108

Top 3 Functional Annotations

Value Algorithm Source
Putrescine-binding periplasmic protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7U512_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 90.2
  • Coverage: 286.0
  • Bit_score: 537
  • Evalue 8.30e-150
  • rbh
Putrescine-binding periplasmic protein {ECO:0000256|PIRNR:PIRNR019574}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.2
  • Coverage: 286.0
  • Bit_score: 540
  • Evalue 1.40e-150
potF1; putrescine/spermidine ABC transporter, substrate-binding component similarity KEGG
DB: KEGG
  • Identity: 89.9
  • Coverage: 286.0
  • Bit_score: 535
  • Evalue 1.30e-149
  • rbh

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Taxonomy

Rhizobium sp. YS-1r → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 861
GTGCCGACCGCGCCCTTCCTCGCCCGCCAGATCCAGGCCGGCGTCTTCCAGAAGCTCGACAAGTCGAAACTGCCGAACCTCTCCAACATGTGGCCCGAGGTGATGGAGCGGCTGGCGAAATACGATCCCGGTAACGAATATGCCGTCAACTATATGTGGGGCACGACCGGCATCGGCTACAATGTCGAGAAGGTCAAGGCAGCCCTCGGCGACGTGCCCGTCGACAGCTGGGACATCCTGTTCAAGCCGGAGAATGCCGAGAAGCTGAAGGCCTGCGGCATCAATATTCTCGATGCCTCCGACGAGACCTTCGCCATCGCGATGAACTACATCGGCAAGAACCCCGACAGCAAGGAAACGGCCGATCTGGAGGCCGGCGGCGAGGTTTATGCCAAGATCCGCCCCAATGTGAAGACCTTCAACTCGTCCGCCTATATCGACGAACTGGCCAATGGCGACAGCTGCATCAGCATCGGCTGGTCGGGTGACGTGCTGCAGGCCAAGAACCGCGCCGTCGAAGCCAAGAACGGGGTGAACGTCAATTTCGTCATCCCCAAGGAAGGCACCTATATGTGGTTCGACAATCTGGCGATCCCGGCCGATGCCAAGAATGTCGAGGAGGCGCACGCCTTCATCAACTATTTGATGAAGCCAGAGGTCATCGCCAAAGCGTCCAACTATGTCCAGTATGCCAACGGCAACCTGGCCTCGCAGAAATTCATCGACGAATCGGTCCTCAAGAATCCGTCCGTCTATCCGAGCGAGGAGATGATGAAGAAACTCTTCACCATCTCCCCCTACGGCCCGCGCGAGCAGCGCGTGCTGAACCGGATCTGGACGCAGATCAAGACGGGAAGCTGA
PROTEIN sequence
Length: 287
VPTAPFLARQIQAGVFQKLDKSKLPNLSNMWPEVMERLAKYDPGNEYAVNYMWGTTGIGYNVEKVKAALGDVPVDSWDILFKPENAEKLKACGINILDASDETFAIAMNYIGKNPDSKETADLEAGGEVYAKIRPNVKTFNSSAYIDELANGDSCISIGWSGDVLQAKNRAVEAKNGVNVNFVIPKEGTYMWFDNLAIPADAKNVEEAHAFINYLMKPEVIAKASNYVQYANGNLASQKFIDESVLKNPSVYPSEEMMKKLFTISPYGPREQRVLNRIWTQIKTGS*