ggKbase home page

SCNpilot_cont_500_bf_scaffold_3546_5

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 2623..3225

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate binding protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CS44_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 96.5
  • Coverage: 200.0
  • Bit_score: 411
  • Evalue 4.80e-112
ABC transporter substrate binding protein {ECO:0000313|EMBL:EYR78435.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.5
  • Coverage: 200.0
  • Bit_score: 411
  • Evalue 6.70e-112
spermidine/putrescine ABC transporter similarity KEGG
DB: KEGG
  • Identity: 93.5
  • Coverage: 200.0
  • Bit_score: 403
  • Evalue 5.40e-110

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 603
ATGGCGATGAACACGCTCGGCCTTTCCGACGTGAAGAACCCCGGAAACCCGAGCACCGCCGAAATCGACGCCGCCGCCGCCTTCCTCGTTTCCAAGAAGAAGGAAGGCCAGTTCCGCGCGCTCTGGGGCGATTTCGGCGAGCTGGTCAATCTGATGGCCTCGGGCGAGATGGTGGTCTGCGACGCCTGGCAGCCGGCGGTGATGGCCGTCAAGGCGCAGGGCAAGCCCTGCCGCTATGCGGTGCCGAAGGAAGGCTATCGCGGCTGGGCCATCGGCCCCTCGATGATCGCAGGCACCACCAATCGCGACGCCGTCATCGCCTATGCCGACTACTGGCTGTCGGGCGAGCCGGGCATCACCGTTTCCGAGCAGGGCTACTATTCGCCCTCGACCAACATCAAGGACGTCATGGCGCCGGAGAAATACGCCTTCTGGTACGAGGGCAAGCCCTGGGTCGGCGCGGAAGAGCGCGGCATCAAGGAAGGCGACCTGCGCGACGGCGGCTCGCTGGAAGAACGCGCCAAGAACGTCGCCTACTGGCACCAGTGGCCGTCGGAATACGACCACCTCATCCAGAAGTGGGACGAGTTCCTCAACGCCTGA
PROTEIN sequence
Length: 201
MAMNTLGLSDVKNPGNPSTAEIDAAAAFLVSKKKEGQFRALWGDFGELVNLMASGEMVVCDAWQPAVMAVKAQGKPCRYAVPKEGYRGWAIGPSMIAGTTNRDAVIAYADYWLSGEPGITVSEQGYYSPSTNIKDVMAPEKYAFWYEGKPWVGAEERGIKEGDLRDGGSLEERAKNVAYWHQWPSEYDHLIQKWDEFLNA*