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SCNpilot_cont_500_bf_scaffold_3969_11

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(10951..11838)

Top 3 Functional Annotations

Value Algorithm Source
Multidrug resistance efflux pump n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=J0H5S9_RHILT similarity UNIREF
DB: UNIREF100
  • Identity: 76.7
  • Coverage: 266.0
  • Bit_score: 394
  • Evalue 1.20e-106
secretion protein HlyD; K03543 multidrug resistance protein A similarity KEGG
DB: KEGG
  • Identity: 76.7
  • Coverage: 266.0
  • Bit_score: 394
  • Evalue 3.70e-107
Multidrug resistance efflux pump {ECO:0000313|EMBL:EJB05450.1}; Flags: Precursor;; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.7
  • Coverage: 266.0
  • Bit_score: 394
  • Evalue 1.60e-106

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Taxonomy

Rhizobium leguminosarum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 888
GTGGATCGATGGGAGTTTCCTGGTCTCCACGAACGATGCCTATATCCATGGCGATATCGCGACTACACCATCGCCGTCGACCAGGCCAAGGCGCAGATCGCCACCCAGAAGCTGTCGCTGGATCGCATCGATGCCCAGATCGCCGGGGCGCAATCGTCGCTGAAGCAGGCCGAGGCCCAGCAGGGCGCGCTGGAGGCGGCGCTGCGCGGTGCGGAAATCAATCGCAAACGCGCCGCCGAACTGCAGCAAAAGTCCGTCGGCACCGTCGCCTCGCTCGACAATGCCGAAATCGCGCTGCAACAGGCCCAGGCCAATCTCGCCGCCGGACAGGCGAGCGTCACCGCCGCCGGCTCCAACATCACACTCCTGCAGGCGCAGCGCAAGGAAGCCGAAAGCACCGTGCGCTCGCTGGAGCTGACCCGCGACAAGGCGACCCGCGACCTCGGCTTCACGATCCTGCGCGCCCCCTATGACGGCATCATCGGCAATGTCTCGGTGCAGGTCGGCGACCTGGTCTCGCCCGGCACGCGGCTTGCCGCGCTGGTTCCGGTGAAGGAGCTTTATATCGAGGCCAACTTCAAGGAAACGCAGATCTCGCAGCTGAAGACCGGCGAGAAGGTGCGCGTCCATGTCGATGCCTTTGACGACAAGCCGGTCATCGGCACGGTGCAGTCGATCGCGCCGGCCTCCGGCTCGGTCTTCTCGATGCTGCCGCCGGAAAACGCCACCGGCAACTTCACCAAGGTGATCCAGCGCGTGCCGGTGCGCATCGCGCTGCCGCAGGACGCCCTCGACAGCGGCCACCTGCGCGCCGGCCTCAGCGTCGTCGTCGACGTCGACACCCGTACCGCCCCGCAGGGCGGCGCGATGGCGGCCGAACAGAAGTAA
PROTEIN sequence
Length: 296
VDRWEFPGLHERCLYPWRYRDYTIAVDQAKAQIATQKLSLDRIDAQIAGAQSSLKQAEAQQGALEAALRGAEINRKRAAELQQKSVGTVASLDNAEIALQQAQANLAAGQASVTAAGSNITLLQAQRKEAESTVRSLELTRDKATRDLGFTILRAPYDGIIGNVSVQVGDLVSPGTRLAALVPVKELYIEANFKETQISQLKTGEKVRVHVDAFDDKPVIGTVQSIAPASGSVFSMLPPENATGNFTKVIQRVPVRIALPQDALDSGHLRAGLSVVVDVDTRTAPQGGAMAAEQK*