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SCNpilot_cont_500_bf_scaffold_3969

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3969_1
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..547
DNA (546bp) protein (182aa)
Uncharacterized protein n=2 Tax=Rhizobium leguminosarum bv. trifolii RepID=B5ZQ89_RHILW
Uncharacterized protein {ECO:0000313|EMBL:KEC74629.1}; TaxID=1408223 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. phaseoli CCGM1.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3969_2
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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541..1650
DNA (1110bp) protein (370aa)
Putative nickel ABC transporter, permease protein n=1 Tax=Rhizobium etli (strain CFN 42 / ATCC 51251) RepID=Q2K449_RHIEC
High-affinity nickel/cobalt transporter protein {ECO:0000313|EMBL:AJC81166.1}; TaxID=1432049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. phaseoli str. IE4803.;"
nickel ABC transporter, permease; K08970 nickel/cobalt exporter
SCNpilot_cont_500_bf_scaffold_3969_3
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1693..1902)
DNA (210bp) protein (70aa)
hypothetical protein n=1 Tax=Agrobacterium sp. 224MFTsu3.1 RepID=UPI0003787538
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGE81560.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
SCNpilot_cont_500_bf_scaffold_3969_4
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1982..2689)
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI00037352B3 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB72470.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_3969_5
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2798..3436)
DNA (639bp) protein (213aa)
eda; keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; K01625 2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.16]
Ketohydroxyglutarate aldolase {ECO:0000313|EMBL:AHF85708.1}; EC=4.1.2.14 {ECO:0000313|EMBL:AHF85708.1};; EC=4.1.3.16 {ECO:0000313|EMBL:AHF85708.1};; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM1689.;"
ketohydroxyglutarate aldolase n=1 Tax=Rhizobium leguminosarum RepID=UPI00035EE473
SCNpilot_cont_500_bf_scaffold_3969_6
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3597..4091
DNA (495bp) protein (165aa)
adenylate cyclase n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00036CDF07
Adenylate cyclase {ECO:0000313|EMBL:AHF85709.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM1689.;"
adenylate cyclase
SCNpilot_cont_500_bf_scaffold_3969_7
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4152..5093
DNA (942bp) protein (314aa)
UPF0176 protein BN77_0298 n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0PU29_9RHIZ
UPF0176 protein BN77_0298 {ECO:0000256|HAMAP-Rule:MF_00469}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium mesoamericanum STM3625.;"
hypothetical protein; K07146 UPF0176 protein
SCNpilot_cont_500_bf_scaffold_3969_8
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5154..7346)
DNA (2193bp) protein (731aa)
diguanylate cyclase n=1 Tax=Rhizobium leguminosarum RepID=UPI0003774BBD
GGDEF/EAL domain-containing protein {ECO:0000313|EMBL:AIC29027.1}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. IE4771.;"
transmembrane sensory box GGDEF/EAL family protein
SCNpilot_cont_500_bf_scaffold_3969_9
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7462..8835)
DNA (1374bp) protein (458aa)
Beta-glucosidase {ECO:0000256|RuleBase:RU361175}; EC=3.2.1.21 {ECO:0000256|RuleBase:RU361175};; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
bgl; beta-glucosidase; K05350 beta-glucosidase [EC:3.2.1.21]
Beta-galactosidase n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4FDK8_9RHIZ
SCNpilot_cont_500_bf_scaffold_3969_10
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9322..10908)
DNA (1587bp) protein (529aa)
MFS transporter n=1 Tax=Rhizobium giardinii RepID=UPI000365F085 rbh
MFS transporter {ECO:0000313|EMBL:KDP76713.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
EmrB/QacA family drug resistance transporter rbh
SCNpilot_cont_500_bf_scaffold_3969_11
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10951..11838)
DNA (888bp) protein (296aa)
Multidrug resistance efflux pump n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=J0H5S9_RHILT
secretion protein HlyD; K03543 multidrug resistance protein A
Multidrug resistance efflux pump {ECO:0000313|EMBL:EJB05450.1}; Flags: Precursor;; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;"
SCNpilot_cont_500_bf_scaffold_3969_12
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12203..12880
DNA (678bp) protein (226aa)
Transcriptional regulator n=1 Tax=Rhizobium sp. CF080 RepID=J2H769_9RHIZ
TetR family transcriptional regulator {ECO:0000313|EMBL:KGD91960.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
TetR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_3969_13
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13027..13215
DNA (189bp) protein (63aa)
TerC family integral membrane protein n=2 Tax=Rhizobium etli RepID=S5SP64_RHIET
TerC family integral membrane protein
TerC family integral membrane protein {ECO:0000313|EMBL:AIC29043.1}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. IE4771.;"
Displaying 13 items

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