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SCNpilot_cont_500_bf_scaffold_4425_11

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(11407..12429)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type sugar transport system, periplasmic component n=1 Tax=Rhizobium sp. CF142 RepID=J1SV93_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 70.7
  • Coverage: 341.0
  • Bit_score: 463
  • Evalue 2.40e-127
LacI family transcriptional regulator protein {ECO:0000313|EMBL:AJD42871.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.1
  • Coverage: 341.0
  • Bit_score: 466
  • Evalue 3.90e-128
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 69.8
  • Coverage: 341.0
  • Bit_score: 453
  • Evalue 4.50e-125

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Taxonomy

Rhizobium gallicum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1023
ATGCGGCCGACCGTTCACGATATCGCCGATCACGCGGGCGTCAGCCTCGCCACCGTCGACCGGGTTTTGAACCGGCGGCCTGGGGTGCGGGCCGCGACGCGGGCGCGTGTCGAGGCGGCCATCGAGACGCTGGGTTATGTCCGCGACGTCGCCGCCGCCAATCTCGCCAAGGGCCGGGTCTATCCCTTCACCTTCATCCTGCCCTCCAGCGACAATTCCTTCATGCACGGTCTGCATGACGAACTGCGCCATGCCATGGCCCGCAGCGCCAGCGAACGCACCAATATCCGCATCGTCGAAGTGCCCGCTTTCGAGCCTACCGCGCTGATTGCGACGCTTGCCGAAGCGCGGGACACGCAACCGGCCGGCATCGCGCTGGTCGCGGTGGAGGACGAGGGCGTGCGCGCGGCGATCGATGCCATCGCCGCCGAGGGCATTCCGGTGGTGACGCTGGTTTCGGACCTGCCGGGCTCACGCCGCGCCCATTATGCCGGCGTCGACAACATCGCCGCGGGGCGCACCGCCGGCGGGCTGATCGGCCGCTTCCTGCGCGGCCGCGCCGGAAAAATCGGCGTACTCGCCGGCTCGATGCTGGTGCGCGACCATCGCGAGCGGCTCGACGGTTTTTCGGCTGTTCTTACCGCCGATTATCCCGGTCTCGCCATCCTGCCAGTGCGCGAGGGGCGCGACGACCCGGAGGTGGCGCGCGCCGCCGTCGCCGGCTTGATGGCAGAGCATCCTGGCCTGCTCGGAATCTACAGCCTGGGCGCCGGCAATCGCGGGCTGATCGCGGCGCTGAAGGCGCGGCCGGATATCAGGCCGGTGGTGATCGCCCACGAACTGACCGCCTTTACCCGCGCCGCGCTGAGCGAGGGCCTGATCGACGCCGTGCTCAACCAGGATGCCGGCCATGAAATCCGCAGCGCCATCCGCGTGCTGAAGGCAAAGGCGGACGGCGTGCCGGTCATCGCCGCGCAGGAGCGTATCCGCATCGACATATTCCTGAAGGACAACCTGCCGTGA
PROTEIN sequence
Length: 341
MRPTVHDIADHAGVSLATVDRVLNRRPGVRAATRARVEAAIETLGYVRDVAAANLAKGRVYPFTFILPSSDNSFMHGLHDELRHAMARSASERTNIRIVEVPAFEPTALIATLAEARDTQPAGIALVAVEDEGVRAAIDAIAAEGIPVVTLVSDLPGSRRAHYAGVDNIAAGRTAGGLIGRFLRGRAGKIGVLAGSMLVRDHRERLDGFSAVLTADYPGLAILPVREGRDDPEVARAAVAGLMAEHPGLLGIYSLGAGNRGLIAALKARPDIRPVVIAHELTAFTRAALSEGLIDAVLNQDAGHEIRSAIRVLKAKADGVPVIAAQERIRIDIFLKDNLP*