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SCNpilot_cont_500_bf_scaffold_4703_10

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(10133..11521)

Top 3 Functional Annotations

Value Algorithm Source
Lipid A core-O-antigen ligase-like enyme n=1 Tax=Rhizobium sp. AP16 RepID=J2DL90_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 45.6
  • Coverage: 443.0
  • Bit_score: 402
  • Evalue 5.10e-109
Uncharacterized protein {ECO:0000313|EMBL:KEA05583.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.4
  • Coverage: 443.0
  • Bit_score: 403
  • Evalue 5.50e-109
synthesis of o-antigen protein similarity KEGG
DB: KEGG
  • Identity: 45.6
  • Coverage: 443.0
  • Bit_score: 402
  • Evalue 2.10e-109

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1389
ATGAGGCGGCGCTTGCGAACCGAACGGCCCGAATGCGGTGGAGACGAACACTTGGATGCCCTGAACGCTATCGAAACCCGTGTGAAACTGCCCGTGGCCCTTGCCGTTCTCGGCAGCCTTCTGTGGATCCTGATGGCGACCGCGACGGTCATCGAGAGCGACACCTACCGTTACGCCACCGTGCTGCTGACGCTGATCGGCGGCTATTATTCCTATACGCGGCTGTCCTTCGTGCGCATGCACTGGGCCGGCTGGCTGTGCATCGCCTGGACGCTCTATGCCGTCGCCCGCTTCCTGCTTCTGATCTACAGCTCGCCGGACCGCCAGCGCGGCGCGTCGGAATGGCTGTATTTCTTCCCGCTGTTCTTTCCCTTCCTGGGGGCGGCGCTGGTCGTCTACCGTCCCTATGTGTCGCGCATTCTCGCCGGCTATTTCGTGCTGGCGCTGATCTTCCTGCTGATCCTCACCGACTACCGCGGCATTCTTTCGGGCGAGCCGGTGACGCCGATGATCCAGCACAACCGCATCCATGGCGCCGTCGCCTGTGGCTTCATGCTGATCGGCGCGTTCTTCTGGATGATGCACAATCTCTGTCACCATGCATGGTCCGACTGGCGGCTGCGCCTGTCGGTGACCTGTACGCCACCGATCGTCCTGCTCAGCCTGCTCAACATCTTCGGCTCCAAATCGAAGGGCGTTTGGATGGCGATGGCGATCACCCTGCCGCTGATCTATCTGCTGGCGCATGGCTATATGCGCGCCCGCTTCATCCGCGTTCTCGGCGCGGCGATGGCGATCTGTCTGGTGGCCGGCATCGCGCTGTTCTGGGGCAATATCGCCCAGACGGCGGGGCCGACGATCAACGCCATCGGCGCGACCGTGCAGGAGCTTTCCAATTCCGGCGACGTCTCCTCCGCCGTCCATGACGCCATCCGCTCCGAGGACACGCCGCTGTCGATGAACGAGCGCATGCAGCTCTGGACCAATGCCTGGGAAATCTTTCGGACCTCGCCGGTCTTCGGCCAGGGCAACGACTGGCTGGAGAGCTGGCAGAAGACCGAATATGCCAATGTCGGCTATACGCTGCTGCACAACGGCTATTTGGAGATCCTCGTGCGCCACGGCCTGTTCGGGCTCACCGTCTTTGCCCTGCTGCTCGCCGTCTTCGTCGATGCCATCAGGCGCGCCCGGCGTCTCGGGCTGATGTCGCTGCAGGCGGCGCATGCCTATTACGCGTCGATTGCCTATTTCTGCCTGACGCTGCTCAGCAATTCCAACAATCGCCTGGCGATCGGGGAAAGCTTCTTCATGATCGTGGCGGCCATCGCCTTCCATTGCCTGATCCTGATCGAGATCCAGGAAAAAGGCTGGCCTGAGGAAAAGGCCTGA
PROTEIN sequence
Length: 463
MRRRLRTERPECGGDEHLDALNAIETRVKLPVALAVLGSLLWILMATATVIESDTYRYATVLLTLIGGYYSYTRLSFVRMHWAGWLCIAWTLYAVARFLLLIYSSPDRQRGASEWLYFFPLFFPFLGAALVVYRPYVSRILAGYFVLALIFLLILTDYRGILSGEPVTPMIQHNRIHGAVACGFMLIGAFFWMMHNLCHHAWSDWRLRLSVTCTPPIVLLSLLNIFGSKSKGVWMAMAITLPLIYLLAHGYMRARFIRVLGAAMAICLVAGIALFWGNIAQTAGPTINAIGATVQELSNSGDVSSAVHDAIRSEDTPLSMNERMQLWTNAWEIFRTSPVFGQGNDWLESWQKTEYANVGYTLLHNGYLEILVRHGLFGLTVFALLLAVFVDAIRRARRLGLMSLQAAHAYYASIAYFCLTLLSNSNNRLAIGESFFMIVAAIAFHCLILIEIQEKGWPEEKA*