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SCNpilot_cont_500_bf_scaffold_4703

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4703_1
Hoeflea phototrophica, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..635)
DNA (633bp) protein (211aa)
ABC transporter ATP-binding protein n=1 Tax=Rhizobium giardinii RepID=UPI00036A716F
ATPase component of various ABC-type transport system, containing duplicated ATPase {ECO:0000313|EMBL:EDQ32638.1}; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea phototrophica DFL-43.;"
ABC-transporter ATP-binding protein system; K02031 peptide/nickel transport system ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_4703_2
Hoeflea phototrophica, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(772..1749)
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Sinorhizobium meliloti Rm41 RepID=K0PUK5_RHIML rbh
Uncharacterized protein {ECO:0000313|EMBL:EDQ32637.2}; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea phototrophica DFL-43.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_4703_3
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1746..3029)
DNA (1284bp) protein (428aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI000379544B rbh
Family 3 adenylate cyclase {ECO:0000313|EMBL:EJJ26792.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
adenylate cyclase-like protein
SCNpilot_cont_500_bf_scaffold_4703_4
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3961..4566
DNA (606bp) protein (202aa)
UDP-N-acetyl-D-glucosamine dehydrogenase n=1 Tax=Sinorhizobium medicae RepID=UPI000372F635
UDP-N-acetyl-D-glucosamine dehydrogenase {ECO:0000313|EMBL:KDP72719.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
putative nucleotide-sugar dehydrogenase (UDP-glucose/GDP-mannose dehydrogenase)
SCNpilot_cont_500_bf_scaffold_4703_5
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4556..5719)
DNA (1164bp) protein (388aa)
UPI0003D02C1E related cluster n=1 Tax=unknown RepID=UPI0003D02C1E rbh
Adenylate cyclase {ECO:0000313|EMBL:ESZ21169.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_4703_6
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5827..6306
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6TX98_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN85029.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4703_7
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6373..7320
DNA (948bp) protein (316aa)
membrane protein n=1 Tax=Rhizobium meliloti RepID=UPI00037209AD rbh
Putative transmembrane protein {ECO:0000313|EMBL:AHK42975.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
putative transmembrane protein; K15270 S-adenosylmethionine uptake transporter rbh
SCNpilot_cont_500_bf_scaffold_4703_8
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7422..7982
DNA (561bp) protein (187aa)
Lipid carrier : UDP-N-acetylgalactosaminyltransferase {ECO:0000313|EMBL:CDS53588.1}; EC=2.4.1.- {ECO:0000313|EMBL:CDS53588.1};; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;"
Galactosyltransferase protein n=1 Tax=Herbaspirillum seropedicae (strain SmR1) RepID=D8IUF8_HERSS
galactosyltransferase; K13012 O-antigen biosynthesis protein WbqP
SCNpilot_cont_500_bf_scaffold_4703_9
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8142..10100
DNA (1959bp) protein (653aa)
dTDP-glucose 4,6-dehydratase protein n=2 Tax=Rhizobium tropici RepID=L0LEA7_RHITR
lpsB2; dTDP-glucose 4,6-dehydratase protein
dTDP-glucose 4,6-dehydratase protein {ECO:0000313|EMBL:AGB69713.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_4703_10
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10133..11521)
DNA (1389bp) protein (463aa)
Lipid A core-O-antigen ligase-like enyme n=1 Tax=Rhizobium sp. AP16 RepID=J2DL90_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KEA05583.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
synthesis of o-antigen protein
SCNpilot_cont_500_bf_scaffold_4703_11
unknown

Not on your lists

11739..11885
DNA (147bp) protein (49aa)

This feature has no annotations

Displaying 11 items

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